Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 145 2e-29
seq5492 136 9e-27
seq48881 132 1e-25
seq157463 127 5e-24
seq33159 123 6e-23
seq90327 102 2e-16
seq102059 98.7 2e-15
seq109872 95.1 3e-14
seq89363 95.1 3e-14
seq104951 93.3 9e-14
seq74389 91.5 3e-13
seq123873 84.2 5e-11
>seq63810
Length=35167
Score = 145 bits (160), Expect = 2e-29
Identities = 168/225 (75%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| |||||||||||||| || || ||||| |||| |||||
Sbjct 27692 TCTGAGACGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGT 27751
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || || ||||| | || || ||||| || || |||||
Sbjct 27752 GCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCC 27811
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||||||||||| || || |||||| ||||| |||||||| ||| ||||| ||
Sbjct 27812 CTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 27868
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 27869 CAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27913
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| ||||||||||| || || || ||||| |||| |||||
Sbjct 27464 TCTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 27523
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || || ||||| | || || ||||| || || |||||
Sbjct 27524 GCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCC 27583
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||||||||||| || || |||||| ||||| |||||||| ||| ||||| ||
Sbjct 27584 CTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 27640
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 27641 CAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27685
Score = 138 bits (152), Expect = 3e-27
Identities = 167/226 (74%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| ||||||||||| || || || ||||| |||| |||||
Sbjct 27920 TCTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 27979
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || || ||||| | || || ||||| || || |||||
Sbjct 27980 GCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCC 28039
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||||||||||| || || |||||| ||||| |||||||| ||| ||||| ||
Sbjct 28040 CTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 28096
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| | ||||| || ||||| || || || || | ||||||
Sbjct 28097 CAGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATT 28142
Score = 113 bits (124), Expect = 1e-19
Identities = 153/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||||||||| || || || ||||| |||| ||||| | ||||||||
Sbjct 27249 ACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27308
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| | | || ||||| || || |||| |||||||||||
Sbjct 27309 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGCTGCCCTCTTTGTCTTGG 27368
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || |||||| ||||| |||||||| ||| ||||| || ||||| | | |
Sbjct 27369 ATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGAC 27425
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || ||| | || || ||||| | |||||
Sbjct 27426 TGACCGGTCGAGGTCTTCACGAAGATCTGCAT 27457
>seq5492
Length=9153
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| | |
Sbjct 3819 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCAC 3760
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| | ||||| || || ||||| |||| ||| || || |||||||| |||||
Sbjct 3759 CCATCTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 3700
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || | || ||| | ||| || || |||||
Sbjct 3699 TTATCCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCAAGGGTTCAACCTCGAGGGTG 3640
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 3639 ATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 3602
>seq48881
Length=14873
Score = 132 bits (146), Expect = 1e-25
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || ||||| || | |||||| | ||||||||
Sbjct 7405 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 7464
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| ||||| ||||| || | || ||||| || || ||||| || || || ||
Sbjct 7465 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 7524
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || |||||||||||||| ||||| || ||||| | |||||
Sbjct 7525 ATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 7584
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| |||| || || ||||| | ||||||||
Sbjct 7585 CCCGTCAGGGTCTTCACGAAAATTTGCATTT 7615
>seq157463
Length=7943
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| ||||||||||||||||||||||| ||||| || | | ||| |
Sbjct 343 AGTCTCAACACAAGATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAAAGTACGT 402
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| |||||||| || || ||||| ||| ||| || | |||||||| |||||
Sbjct 403 CCATCTTCCAGCTGCTTGCCAGCAAAGATCGGTCTTTGCTGAGCAGGAGGAATTCCTTCC 462
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || | || ||| | || || || || |||| ||| || ||||| ||
Sbjct 463 TTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAACCTCAAGAGTG 522
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | |||| ||||| | |||||
Sbjct 523 ATGGTCTTCCCAGTAAGGATTTTCACGAAAAGCTGCAT 560
>seq33159
Length=15523
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 2101 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGCAT 2160
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| |||| || | || |||||||| ||||
Sbjct 2161 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACAGATCAGGAGGAATTTCTTCC 2220
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || || || || || ||| || || |||||
Sbjct 2221 TTATCCTGTATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTG 2280
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| || || | |||||
Sbjct 2281 ATGGTCTTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 2318
>seq90327
Length=63722
Score = 102 bits (112), Expect = 2e-16
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCT 194981
||| |||||| || |||||||||||||| |||| ||| ||||| || | |||| || |
Sbjct 54702 AGTGTCAAAATCAGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGACAAG-GTACA 54644
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||| | |||| ||| || || |||||||| |||||
Sbjct 54643 TCCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTC 54584
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || || || || || || || || | || || || ||| || ||||| ||
Sbjct 54583 CTTATCCTGGATCTTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACCTCAAGAGT 54524
Query 195102 AACCGTCTTTCCTGT 195116
| ||||| || ||
Sbjct 54523 GATGGTCTTCCCGGT 54509
>seq102059
Length=16704
Score = 98.7 bits (108), Expect = 2e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||| || || | ||||| |||| ||||| | |||||||| |||||
Sbjct 6010 GTGCAGAGTGGACTTCTTCTGGGTGTTGTAGTCGGACAGAGTGCATCCATCTTCCAGCTG 6069
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || ||||| | || ||||| || || ||||| ||||||||||| || ||
Sbjct 6070 TTTCCCAGCAAAGATCTACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTT 6129
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
|||||| ||||| ||||||||
Sbjct 6130 GGCCTTGACATTCTCGATGGTGTC 6153
>seq109872
Length=19372
Score = 95.1 bits (104), Expect = 3e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000
||||||||||||||||| ||||| || || | ||| | | ||||| || ||||| ||
Sbjct 16148 AGAGTGGACTCTTTTTGCATATTATAGTCTGAGAGAATGCGACCATCCTCCAGCTGTTTG 16207
Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060
|| || || | || | ||| ||||| || || |||||||| ||||||| |||||
Sbjct 16208 CCCGCAAAAAACAGACATTGCTGGTCAGGTGGGATGCCTTCCGTGTCTTGGATTTTAGCT 16267
Query 195061 TTGACGTTCTCAATGGTGTC 195080
||||| |||||| | |||||
Sbjct 16268 TTGACATTCTCAGTAGTGTC 16287
>seq89363
Length=18264
Score = 95.1 bits (104), Expect = 3e-14
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| ||||| ||||| ||||| || |||||
Sbjct 15797 GTGCAGAGTGGACTCTTTCTGGATATTATAATCTAAGAGAGTGG--CCATCCTCCAGCTG 15854
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || | || | ||||| || ||||| | || ||||| || |||||||| |||||
Sbjct 15855 TTTGCCCTCAAAAAGCAGTCGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGGATTTT 15914
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
|||||||||||| |||||||
Sbjct 15915 AGCGTTGACGTTCTCAGTGGTGTC 15938
>seq104951
Length=12537
Score = 93.3 bits (102), Expect = 9e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| | || || || || | ||||| | ||||| || |||||
Sbjct 11039 GTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTG 11098
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || | || || || || || ||||| || || ||||| || |||||||| |||||
Sbjct 11099 TTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTT 11158
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
|||||||| ||||| |||||
Sbjct 11159 GGCTTTGACGTTTTCAATAGTGTC 11182
>seq74389
Length=16610
Score = 91.5 bits (100), Expect = 3e-13
Identities = 145/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| || || | ||||| | ||||| || | |||
Sbjct 10470 GTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCATCTG 10411
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || || || | | ||||| || || ||||| || |||| ||| |||||
Sbjct 10410 TTTGCCGGCAAAAATCAGATGCTCCTGGTCAGGTGGGATGCCCTCCTTGTGTTGGATTTT 10351
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| ||||| || ||||| ||| || | ||||| || | ||||| ||
Sbjct 10350 AGCTTTGACATTCTCGATAGTGTC---ACTGGGCTCGATCTCAAGTGTGATGGTCTTGCC 10294
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || || || | |||||
Sbjct 10293 CGTCAAGGTCTTCACAAAGATCTGCAT 10267
>seq123873
Length=8769
Score = 84.2 bits (92), Expect = 5e-11
Identities = 101/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||||||||| || ||||| || || | ||||| ||||| || ||||| || |||
Sbjct 301 GTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGGCCATCCTCCAGCTGTTTGCCT 242
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| || || || || || ||||| || || |||| | |||||||| ||||| |||
Sbjct 241 GCAAAAATCAGACGCTGCTGGTCAGGCGGGATGC---CCTTGTCTTGGATTTTAGCTTTG 185
Query 195064 ACGTTCTCAATGGTGTC 195080
|| |||||| | |||||
Sbjct 184 ACATTCTCAGTAGTGTC 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1107200055103500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |