Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq12448 113 4e-20
>seq12448
Length=17785
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | ||||||||| || || | ||| || || || || | | ||| | ||||
Sbjct 3331 AACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCATCCATCT 3390
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| |||||||| |||| | || |||| || ||||| |||||||||||
Sbjct 3391 TCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCTTTATCC 3450
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || ||||||| |||||| || || || | ||| || || || |||| ||
Sbjct 3451 TGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTC 3510
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | ||||| || || ||||||||
Sbjct 3511 TTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 3542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395503242298500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |