Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq97121 96.9 1e-14 >seq97121 Length=20842 Score = 96.9 bits (106), Expect = 1e-14 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| || || || || ||||| || || || || ||||||| ||||| ||||| Sbjct 2700 ACCAGTTTCAGCAGTCTTCACGGCTGTGTCGATGAGCCCCTCACGACCCCCCATGGCATG 2759 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| ||| || || | | ||||| |||| || || ||||| Sbjct 2760 GAAAAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 2819 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || |||| |||| | ||||| ||||| |||| || || | || |||| Sbjct 2820 CTCAGGCCCATAGTCGTCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAATCCAAATGG 2879 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839 || ||||| || || ||||||||||| || | | | ||| | ||| |||| Sbjct 2880 AATCCGCTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 2932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468790945088500