Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq97121 96.9 1e-14
>seq97121
Length=20842
Score = 96.9 bits (106), Expect = 1e-14
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
||||||| || || || || ||||| || || || || ||||||| ||||| |||||
Sbjct 2700 ACCAGTTTCAGCAGTCTTCACGGCTGTGTCGATGAGCCCCTCACGACCCCCCATGGCATG 2759
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
||| || | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 2760 GAAAAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 2819
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||| ||| || |||| |||| | ||||| ||||| |||| || || | || ||||
Sbjct 2820 CTCAGGCCCATAGTCGTCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAATCCAAATGG 2879
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839
|| ||||| || || ||||||||||| || | | | ||| | ||| ||||
Sbjct 2880 AATCCGCTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 2932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1468790945088500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |