Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12448 131 2e-25
seq5492 123 2e-23
seq63810 122 8e-23
seq33159 118 1e-21
seq104951 109 5e-19
seq157463 100 3e-16
seq2401 95.1 1e-14
seq74389 87.8 2e-12
seq113583 82.4 7e-11
>seq12448
Length=17785
Score = 131 bits (144), Expect = 2e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 3543 GATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 3484
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| |||||| |||||||| || ||||||||||| ||||| ||||
Sbjct 3483 GGATACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTAATCA 3424
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 3423 GCAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTAAAA 3364
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||| |||| || || || || | |||||| ||
Sbjct 3363 CATTCAACAGGAGTCCACCCTTCATCTTGTGTTGAGA 3327
>seq5492
Length=9153
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || ||||| || ||| ||
Sbjct 3601 GATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTT 3660
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| ||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 3661 GGATACAAAAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 3720
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || | ||| ||| | | | |||| || || ||
Sbjct 3721 GCAAAGACTGATCTTTGCTGGCAAGCAACGGGAAGATGGGTGCACTTTGTCTGACTACAA 3780
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || | |||||| || | || || ||
Sbjct 3781 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 3828
>seq63810
Length=35167
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| |||||||||||| | || || | |||||||| || || || || || || || ||
Sbjct 28144 ACAATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 28085
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || ||||||||||||||||| || || || || ||
Sbjct 28084 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGAC 28025
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || |||||||||||||| ||||||||||| ||| | | |||| || ||
Sbjct 28024 CAGCAGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTAC 27965
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || ||||| || || || ||| ||||
Sbjct 27964 AACATCCAGAAGGAGTCCACTCTGCACCTGGT 27933
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 27685 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 27626
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || || || || ||
Sbjct 27625 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 27566
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||||||| ||||||||||| ||| | | |||| || || |||
Sbjct 27565 CAGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAAC 27506
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||| ||||
Sbjct 27505 ATCCAGAAGGAGTCCACTCTGCACCTGGT 27477
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 27913 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 27854
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || || || || ||
Sbjct 27853 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 27794
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||||||| ||||||||||| ||| | | |||| || || |||
Sbjct 27793 CAGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAAC 27734
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || || || || ||| ||||
Sbjct 27733 ATCCAGAAAGAGTCCACTCTGCACCTGGT 27705
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || |||||| | | || || || || || || |||
Sbjct 27457 ATGCAGATCTTCGTGAAGACCTCGACCGGTCAGTCCATCACCCTGGAGGTGGAGCCCAGT 27398
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || | || || || ||
Sbjct 27397 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCAGCCCCCCTGACCAG 27338
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| ||||||||||| ||| | | |||| || || |||
Sbjct 27337 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAAC 27278
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || |||| |||| ||| | |||||
Sbjct 27277 ATCCAGAAGGAGTCCACTCTGCATCTGGTCCTGCGCTTGAGGGGAGG 27231
>seq33159
Length=15523
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || || || || || || || ||||| || ||| || |
Sbjct 2319 GATGCAGATTTTTGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 2260
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| ||||| || || || |||| ||| ||||| ||||
Sbjct 2259 AGATACAATAGAAAATGTAAAGGCCAAGATACAGGATAAGGAAGAAATTCCTCCTGATCT 2200
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 2199 GTAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTACAA 2140
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || | |||||| || | || || ||
Sbjct 2139 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 2092
>seq104951
Length=12537
Score = 109 bits (120), Expect = 5e-19
Identities = 152/212 (72%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAG-TAGAAGCCA 24761
||||||||||||| ||||| || || || || || || || ||| ||| | || |||
Sbjct 11244 GATGCAGATCTTTGGGAAAACCCTGACAGGCAAGACCATCACACTCAAAGGTCGAGCCCA 11185
Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | |||| || ||| || ||||||||||| || || || || || || |
Sbjct 11184 GTGACACTATTGAAAACGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 11125
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| |||| || ||||||||||||||| | | | ||||| ||||
Sbjct 11124 AGCAGCGTCTGATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATA 11065
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| | || || || || || |||||||||
Sbjct 11064 ACATCGAGAAAGAGTCCACTCTGCACTTGGTG 11033
>seq157463
Length=7943
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||| | || | |||| || || || || || || || || || || ||| || |
Sbjct 561 GATGCAGCTTTTCGTGAAAATCCTTACTGGGAAGACCATCACTCTTGAGGTTGAACCCTC 502
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
| ||| |||||| |||| |||| ||| || || |||||||| ||||| | |||
Sbjct 501 GGGTACAATAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGCTCA 442
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||||| || || |||||||| ||| | | ||||||| || ||
Sbjct 441 GCAAAGACCGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAA 382
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||| || || || || || | |||||| || | || || ||
Sbjct 381 CATTCAAAAAGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 334
>seq2401
Length=18371
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||| | | || || ||||| || || || || || || || || | |||
Sbjct 144 GATGCAGATCTGTGTGAAGACCCTAACAGGCAAGACCATCACCCTTGAGGTCGGGCCCAA 203
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||| |||| || || || || || || ||
Sbjct 204 TGACACTATTGAGAATGTCAAAGCTAAACTCCAAAACAAGGAGGGTATCCCACCTGACCA 263
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| ||||| || ||||||||||||||| | | | ||||| |||||
Sbjct 264 GCAGCGTCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAA 323
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924
|| || || | || || || ||||||||| | || ||||
Sbjct 324 TATCCAGAAAGCGTCCACTCTGCACTTGGTGCTTCGTCTGCG 365
>seq74389
Length=16610
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || | || || || || || || || || | || |||
Sbjct 10266 GATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACACTTGAGATCGAGCCCAG 10325
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || |||||| |||| || || || || || || ||
Sbjct 10326 TGACACTATCGAGAATGTCAAAGCTAAAATCCAACACAAGGAGGGCATCCCACCTGACCA 10385
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
| | | |||| |||||||| |||||| |||||||| | | | ||||| |||||
Sbjct 10386 GGAGCATCTGATTTTTGCCGGCAAACAGATGGAGGATGGCCGCACTCTCTCAGACTATAA 10445
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || || || || |||||||||
Sbjct 10446 TATCCAGAAAGAGTCCACTCTGCACTTGGTG 10476
>seq113583
Length=22641
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/211 (69%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || ||||| || || |||
Sbjct 17648 GATGCAGATCTTG-TGAAGACCCTGACGGGCAAGACCATCACACTCGAGGTCGAGCCCAG 17590
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || || ||| | ||||||||| | || || || || || || ||
Sbjct 17589 TGACACTACTGAGCATGTCAAAGCTCAAATCCAAGACCAGGAGGGCATCCCGCCTGAGCA 17530
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| | ||| || ||||||||||||||| || | | ||||| |||||
Sbjct 17529 GCAGCGTCTGATTTGTGCGGGCAAACAGCTGGAGGATGGCAGCA--CTCTCAGACTATAA 17472
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || || || | |||||||||
Sbjct 17471 TATCCAGAAAGAGTCCACCGTGCACTTGGTG 17441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448994992940000
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