Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq63810 129 4e-25 seq74389 114 8e-21 seq48881 114 8e-21 seq104951 111 1e-19 seq32206 105 4e-18 seq109872 93.3 3e-14 seq33159 91.5 1e-13 seq12448 91.5 1e-13 seq93939 87.8 1e-12 seq89363 86.0 4e-12 seq52881 82.4 5e-11 >seq63810 Length=35167 Score = 129 bits (142), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 27930 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27989 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| || |||||||| | || | ||||| ||||| Sbjct 27990 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 28049 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| ||| || || | ||| |||| Sbjct 28050 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 28107 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || | |||||| |||||||||||||| Sbjct 28108 TCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 28141 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 27474 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27533 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| || |||||||| | || | ||||| ||||| Sbjct 27534 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 27593 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| ||| || || | ||| |||| Sbjct 27594 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 27651 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || | |||||| || |||||||||||| Sbjct 27652 TCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 27686 Score = 122 bits (134), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| ||||| || || |||| |||| Sbjct 27702 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27761 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| || |||||||| | || | ||||| ||||| Sbjct 27762 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 27821 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| ||| || || | ||| |||| Sbjct 27822 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 27879 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || | |||||| || |||||||||||| Sbjct 27880 TCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 27914 Score = 116 bits (128), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||||||||| || | ||| ||||||||| ||||| ||||| || Sbjct 27231 CCTCCCCTCAAGCGCAGGACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 27290 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || ||||| ||||||| | |||||||| | || Sbjct 27291 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 27350 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 ||||| ||||| | || || ||||| || || || | ||| ||| ||| | Sbjct 27351 CTGCCCTCTTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 27408 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| |||| || || || |||||| || |||||||||||| Sbjct 27409 CCTCCAGGGTGATGGACTGACCGGTCGAGGTCTTCACGAAGATCTGCATG 27458 >seq74389 Length=16610 Score = 114 bits (126), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || |||||||| || || |||| |||| Sbjct 10478 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCC 10419 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| || || ||||| || ||||| | | |||||| | || | |||||||||| Sbjct 10418 TCCATCTGTTTGCCGGCAAAAATCAGATGCTCCTGGTCAGGTGGGATGCCCTCCTTGTGT 10359 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| ||||| |||| || |||| Sbjct 10358 TGGATTTTAGCTTTGAC--ATTCTCGATAGTGTCACTGGGCTCGATCTCAAGTGTGATGG 10301 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| | |||||| |||||||||||||| Sbjct 10300 TCTTGCCCGTCAAGGTCTTCACAAAGATCTGCAT 10267 >seq48881 Length=14873 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||||||||| | ||| ||| ||||| ||||| ||||| || Sbjct 7387 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 7446 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 7447 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 7506 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || || || || || || | || ||| ||| | Sbjct 7507 ATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTGGGCTCCA 7564 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| ||||| |||||||| || || || ||||| Sbjct 7565 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATTTGCAT 7613 >seq104951 Length=12537 Score = 111 bits (122), Expect = 1e-19 Identities = 153/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| |||| ||||||||||| || || |||| |||| Sbjct 11031 AGCACCAAGTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCCATCC 11090 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || | || ||||| || |||||||| | || | ||||||||||| Sbjct 11091 TCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 11150 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA-CATCAACGGTTATGGT 34944 | ||||| ||||||| | | || | ||| ||| ||||| | | | || ||||| Sbjct 11151 TGGATTTTGGCTTTGACGTTTTCAATAGTGTCACTGGGCTCGACCTTTGAGTGTGATGGT 11210 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || ||||| || ||||||||||||| Sbjct 11211 CTTGCCTGTCAGGGTTTTCCCAAAGATCTGCAT 11243 >seq32206 Length=52285 Score = 105 bits (116), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 14/214 (7%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| |||||| |||| || || ||| |||| Sbjct 18142 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTAGAGTCTGAGAGAGTGCAGCCATCC 18083 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || || |||| ||||||| || | ||||||||||| Sbjct 18082 TCCAGCTGCTTGCCCGCAAAATTCAGA---TGCTGGT-----GGGATGCCCTCCTTGTCT 18031 Query 34886 TTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || | | ||| ||| |||||| |||| || |||| Sbjct 18030 TGGATTTTAGCTTTGAC--ATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGTGATGG 17973 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| |||| ||||||| |||||||||||||| Sbjct 17972 TCTTGCCCGCGAGGGTCC--ACAAAGATCTGCAT 17941 >seq109872 Length=19372 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || || |||||||| || || |||| |||| ||||| || || || || || Sbjct 16156 CTCTTTTTGCATATTATAGTCTGAGAGAATGCGACCATCCTCCAGCTGTTTGCCCGCAAA 16215 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 | ||| | ||||||||| | || | || ||| |||| | ||||| |||||| | Sbjct 16216 AAACAGACATTGCTGGTCAGGTGGGATGCCTTCCGTGTCTTGGATTTTAGCTTTGAC--A 16273 Query 34906 TGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || | | ||| ||| |||||| |||| | ||||||| ||| | ||||||| Sbjct 16274 TTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGCAATGGTCTAGCCCTTCGGGGTCTTC 16333 Query 34964 ACAAAGATCTGCAT 34977 |||||||||||||| Sbjct 16334 ACAAAGATCTGCAT 16347 >seq33159 Length=15523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | ||| || Sbjct 2104 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGCATCCA 2163 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| || | | || | || | | ||||| Sbjct 2164 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACAGATCAGGAGGAATTTCTTCCTTA 2223 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||| || || || | |||| | || || || || || | ||| ||| Sbjct 2224 TCCTGTATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATG 2283 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || ||||| |||||||| Sbjct 2284 GTCTTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 2318 >seq12448 Length=17785 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| |||| ||||| |||||||| ||||| || | ||| || Sbjct 3328 CTCAACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCATCCA 3387 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| |||||| | | || | || || || Sbjct 3388 TCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCTTTA 3447 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||| || | |||| | || || || || || | ||| ||| Sbjct 3448 TCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATG 3507 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || || || |||||||| Sbjct 3508 GTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 3542 >seq93939 Length=21031 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | |||| | | ||||| | ||| |||| | | |||| |||| ||| Sbjct 20757 ACCAAGTGCAGGGTGGACCCTTTCTGGCTATTAGAGTCTAAGCGAGTGCGGCCATCCTCC 20698 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || || || || | ||| | |||| ||| | || | ||||||||||| | Sbjct 20697 AGCTGTTTGCCTGCAAAAACCAGATGCTGCTAGTCAGGTGGGATGCCCTCCTTGTCTTGG 20638 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||| |||||| || || || | ||| ||| |||||| || | || ||||||| Sbjct 20637 ATTAGAGCTTTGAC--ATTCTCCATGGTGTCACTGGGCTCGACCTCCAGGGGGATGGTCT 20580 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| |||||||| ||||||||||||| Sbjct 20579 TGCCCGTCAGGGTCTTCCCAAAGATCTGCAT 20549 >seq89363 Length=18264 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || ||||| || | || || || |||| Sbjct 15789 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAATCTAAGAGAGTG-GC-CATCC 15846 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || | || | |||||| |||||||| || | ||||||||||| Sbjct 15847 TCCAGCTGTTTGCCCTCAAAAAGCAGTCGCTGCTGGTCAGATGGGATGCCCTCCTTGTCT 15906 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | | | ||| ||| |||||| || | ||||||| Sbjct 15907 TGGATTTTAGCGTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCGAG---TATGGTC 15963 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 || ||| | |||||||| |||||||||||| Sbjct 15964 TTGCCCATCAGGGTCTTCACAAAGATCTGC 15993 >seq52881 Length=22932 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| |||||| || | || || || | |||| ||||| || || || | || ||| Sbjct 19893 TTCTGGATGTTA-AGCCTGAGAGAGTGTGGCCATCCTCCAGCTGTTTGCCCACAAAAATC 19835 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 || | | |||||| | || | ||||| ||||| | ||||| |||||| || || Sbjct 19834 AGATGCTTCTGGTCAGGGGG-ATGCCCTCTTTGTCTTGGATTTTAGCTTTGAC--ATTCT 19778 Query 34910 A--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | | | ||| ||| || ||| |||| || |||||||| || || ||| |||| |||| Sbjct 19777 AAATAGTGTCACTGGGCTTGACCTCAAGTGTGATGGTCTTGCCTGTCAGGCTCTTCACAA 19718 Query 34968 AGATCTGCAT 34977 |||||||||| Sbjct 19717 AGATCTGCAT 19708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325055714349500