Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 129 4e-25
seq74389 114 8e-21
seq48881 114 8e-21
seq104951 111 1e-19
seq32206 105 4e-18
seq109872 93.3 3e-14
seq33159 91.5 1e-13
seq12448 91.5 1e-13
seq93939 87.8 1e-12
seq89363 86.0 4e-12
seq52881 82.4 5e-11
>seq63810
Length=35167
Score = 129 bits (142), Expect = 4e-25
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 27930 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27989
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || ||||| ||||||| || |||||||| | || | ||||| |||||
Sbjct 27990 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 28049
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || || | ||| ||| ||| || || | ||| ||||
Sbjct 28050 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 28107
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || | |||||| ||||||||||||||
Sbjct 28108 TCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 28141
Score = 125 bits (138), Expect = 5e-24
Identities = 158/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 27474 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27533
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || ||||| ||||||| || |||||||| | || | ||||| |||||
Sbjct 27534 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 27593
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || || | ||| ||| ||| || || | ||| ||||
Sbjct 27594 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 27651
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 27652 TCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 27686
Score = 122 bits (134), Expect = 6e-23
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||| ||||| ||||| ||||| || || |||| ||||
Sbjct 27702 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27761
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || ||||| ||||||| || |||||||| | || | ||||| |||||
Sbjct 27762 TCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 27821
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || || | ||| ||| ||| || || | ||| ||||
Sbjct 27822 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 27879
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 27880 TCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 27914
Score = 116 bits (128), Expect = 2e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||||||||| | ||||||||| || | ||| ||||||||| ||||| ||||| ||
Sbjct 27231 CCTCCCCTCAAGCGCAGGACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 27290
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| || || ||||| ||||||| | |||||||| | ||
Sbjct 27291 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 27350
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
||||| ||||| | || || ||||| || || || | ||| ||| ||| |
Sbjct 27351 CTGCCCTCTTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 27408
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || | ||| |||| || || || |||||| || ||||||||||||
Sbjct 27409 CCTCCAGGGTGATGGACTGACCGGTCGAGGTCTTCACGAAGATCTGCATG 27458
>seq74389
Length=16610
Score = 114 bits (126), Expect = 8e-21
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||| ||||| || |||||||| || || |||| ||||
Sbjct 10478 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCC 10419
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| || || ||||| || ||||| | | |||||| | || | ||||||||||
Sbjct 10418 TCCATCTGTTTGCCGGCAAAAATCAGATGCTCCTGGTCAGGTGGGATGCCCTCCTTGTGT 10359
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || || | ||| ||| ||||| |||| || ||||
Sbjct 10358 TGGATTTTAGCTTTGAC--ATTCTCGATAGTGTCACTGGGCTCGATCTCAAGTGTGATGG 10301
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||||| | |||||| ||||||||||||||
Sbjct 10300 TCTTGCCCGTCAAGGTCTTCACAAAGATCTGCAT 10267
>seq48881
Length=14873
Score = 114 bits (126), Expect = 8e-21
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||||||||| | ||| ||| ||||| ||||| ||||| ||
Sbjct 7387 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 7446
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| || | |||||||| | ||
Sbjct 7447 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 7506
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| |||||||| || | || || || || || || || | || ||| ||| |
Sbjct 7507 ATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTGGGCTCCA 7564
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||| |||||||| ||||| |||||||| || || || |||||
Sbjct 7565 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATTTGCAT 7613
>seq104951
Length=12537
Score = 111 bits (122), Expect = 1e-19
Identities = 153/213 (72%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||| |||| ||||||||||| || || |||| ||||
Sbjct 11031 AGCACCAAGTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCCATCC 11090
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || | || ||||| || |||||||| | || | |||||||||||
Sbjct 11091 TCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 11150
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA-CATCAACGGTTATGGT 34944
| ||||| ||||||| | | || | ||| ||| ||||| | | | || |||||
Sbjct 11151 TGGATTTTGGCTTTGACGTTTTCAATAGTGTCACTGGGCTCGACCTTTGAGTGTGATGGT 11210
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || ||||| || |||||||||||||
Sbjct 11211 CTTGCCTGTCAGGGTTTTCCCAAAGATCTGCAT 11243
>seq32206
Length=52285
Score = 105 bits (116), Expect = 4e-18
Identities = 154/214 (72%), Gaps = 14/214 (7%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| |||||| |||| || || ||| ||||
Sbjct 18142 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTAGAGTCTGAGAGAGTGCAGCCATCC 18083
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || || |||| ||||||| || | |||||||||||
Sbjct 18082 TCCAGCTGCTTGCCCGCAAAATTCAGA---TGCTGGT-----GGGATGCCCTCCTTGTCT 18031
Query 34886 TTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || | | ||| ||| |||||| |||| || ||||
Sbjct 18030 TGGATTTTAGCTTTGAC--ATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGTGATGG 17973
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| |||| ||||||| ||||||||||||||
Sbjct 17972 TCTTGCCCGCGAGGGTCC--ACAAAGATCTGCAT 17941
>seq109872
Length=19372
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| || || || |||||||| || || |||| |||| ||||| || || || || ||
Sbjct 16156 CTCTTTTTGCATATTATAGTCTGAGAGAATGCGACCATCCTCCAGCTGTTTGCCCGCAAA 16215
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
| ||| | ||||||||| | || | || ||| |||| | ||||| |||||| |
Sbjct 16216 AAACAGACATTGCTGGTCAGGTGGGATGCCTTCCGTGTCTTGGATTTTAGCTTTGAC--A 16273
Query 34906 TGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || | | ||| ||| |||||| |||| | ||||||| ||| | |||||||
Sbjct 16274 TTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGCAATGGTCTAGCCCTTCGGGGTCTTC 16333
Query 34964 ACAAAGATCTGCAT 34977
||||||||||||||
Sbjct 16334 ACAAAGATCTGCAT 16347
>seq33159
Length=15523
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| ||| |||||| |||||||| ||||| || | ||| ||
Sbjct 2104 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGCATCCA 2163
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| || | | || | || | | |||||
Sbjct 2164 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACAGATCAGGAGGAATTTCTTCCTTA 2223
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | ||| || || || | |||| | || || || || || | ||| |||
Sbjct 2224 TCCTGTATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATG 2283
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || ||||| || ||||| ||||||||
Sbjct 2284 GTCTTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 2318
>seq12448
Length=17785
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| |||| ||||| |||||||| ||||| || | ||| ||
Sbjct 3328 CTCAACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCATCCA 3387
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| |||||| | | || | || || ||
Sbjct 3388 TCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCTTTA 3447
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || ||| || | |||| | || || || || || | ||| |||
Sbjct 3448 TCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATG 3507
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || ||||| || || || ||||||||
Sbjct 3508 GTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 3542
>seq93939
Length=21031
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | |||| | | ||||| | ||| |||| | | |||| |||| |||
Sbjct 20757 ACCAAGTGCAGGGTGGACCCTTTCTGGCTATTAGAGTCTAAGCGAGTGCGGCCATCCTCC 20698
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| || || || || || | ||| | |||| ||| | || | ||||||||||| |
Sbjct 20697 AGCTGTTTGCCTGCAAAAACCAGATGCTGCTAGTCAGGTGGGATGCCCTCCTTGTCTTGG 20638
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
||| |||||| || || || | ||| ||| |||||| || | || |||||||
Sbjct 20637 ATTAGAGCTTTGAC--ATTCTCCATGGTGTCACTGGGCTCGACCTCCAGGGGGATGGTCT 20580
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| ||||| |||||||| |||||||||||||
Sbjct 20579 TGCCCGTCAGGGTCTTCCCAAAGATCTGCAT 20549
>seq89363
Length=18264
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/210 (70%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||| ||||| || ||||| || | || || || ||||
Sbjct 15789 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAATCTAAGAGAGTG-GC-CATCC 15846
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || | || | |||||| |||||||| || | |||||||||||
Sbjct 15847 TCCAGCTGTTTGCCCTCAAAAAGCAGTCGCTGCTGGTCAGATGGGATGCCCTCCTTGTCT 15906
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| |||||| | | | ||| ||| |||||| || | |||||||
Sbjct 15907 TGGATTTTAGCGTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCGAG---TATGGTC 15963
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975
|| ||| | |||||||| ||||||||||||
Sbjct 15964 TTGCCCATCAGGGTCTTCACAAAGATCTGC 15993
>seq52881
Length=22932
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/190 (71%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
||||| |||||| || | || || || | |||| ||||| || || || | || |||
Sbjct 19893 TTCTGGATGTTA-AGCCTGAGAGAGTGTGGCCATCCTCCAGCTGTTTGCCCACAAAAATC 19835
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
|| | | |||||| | || | ||||| ||||| | ||||| |||||| || ||
Sbjct 19834 AGATGCTTCTGGTCAGGGGG-ATGCCCTCTTTGTCTTGGATTTTAGCTTTGAC--ATTCT 19778
Query 34910 A--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| | | ||| ||| || ||| |||| || |||||||| || || ||| |||| ||||
Sbjct 19777 AAATAGTGTCACTGGGCTTGACCTCAAGTGTGATGGTCTTGCCTGTCAGGCTCTTCACAA 19718
Query 34968 AGATCTGCAT 34977
||||||||||
Sbjct 19717 AGATCTGCAT 19708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325055714349500
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