Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq33756 102 1e-16 >seq33756 Length=38327 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | || | |||||||||| | ||||||||||||| || ||||| || || || Sbjct 25372 GATAGCTGGTGCTCTGTGGTGGTACTTTGTATCTAAAGGGATTGAGTACTTGGACACGGT 25431 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||| || || ||||| || ||| || || || || || ||||| ||||| | Sbjct 25432 GTTTTTTATTCTGAGGAAGAAAAATAACCAAGTCTCTTTCCTTCATGTATACCATCACTG 25491 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || |||||||| || | ||| | || ||||| ||| | ||||| || || Sbjct 25492 CACAATGTTTACGTTGTGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACA 25542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901598731280000