Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq124007 82.4 7e-11
seq63810 82.4 7e-11
>seq124007
Length=20016
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| || ||||| | |||||| ||||||||||| || ||||| || ||||| |||
Sbjct 15495 TACTCTACTATTTCTGTGCACAGATTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 15436
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|||||||| || || | |||||| |||||||||| ||
Sbjct 15435 CTTTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGG 15398
>seq63810
Length=35167
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||||||| || || || |||||| |||||||| |||| |
Sbjct 27720 GACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCA 27779
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | ||||| || || || || ||||| ||||| || || || || |
Sbjct 27780 AAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACA 27839
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| || | || | || ||||| |||| || ||
Sbjct 27840 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTC 27899
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 27900 ACGAAGATCTGCATG 27914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475654998780000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |