Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq83376 170 3e-36
seq80301 170 3e-36
seq79723 170 3e-36
seq10813 170 3e-36
seq135659 167 3e-35
seq77571 167 3e-35
seq76101 122 1e-21
seq72956 111 2e-18
seq122114 93.3 6e-13
seq80303 86.0 9e-11
>seq83376
Length=7469
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 526 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 579
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 580 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGCGAGGCGTCGCGC 639
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 640 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 699
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 700 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 748
>seq80301
Length=5813
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 2129 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 2182
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 2183 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGCGAGGCGTCGCGC 2242
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2243 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2302
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 2303 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2351
>seq79723
Length=27194
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 14861 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 14914
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 14915 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGCGAGGCGTCGCGC 14974
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 14975 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 15034
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 15035 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 15083
>seq10813
Length=5319
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 254 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 307
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 308 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGCGAGGCGTCCCGC 367
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 368 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 427
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 428 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 476
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 4800 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 4747
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| ||||| |||
Sbjct 4746 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGGGAGGCGTCGCGC 4687
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 4686 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 4627
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 4626 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 4578
>seq135659
Length=1531
Score = 167 bits (184), Expect = 3e-35
Identities = 178/231 (77%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 1277 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 1330
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCG-GTC 725031
|||||||||||||| ||||||||||| |||| ||||||| | |||||| | |
Sbjct 1331 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGGCGAGGCGTCGCC 1390
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| | |||||||||| || ||| | || ||||||||||| |||||||
Sbjct 1391 GCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGC 1450
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 1451 GCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 1501
>seq77571
Length=13609
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || ||||| | |||| |||||
Sbjct 475 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATCC-CGTCCAAGGCCATG 528
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| ||||| |||
Sbjct 529 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAACGCATCGCGGGGGAGGCGTCGCGC 588
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 589 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 648
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 649 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 697
>seq76101
Length=7649
Score = 122 bits (134), Expect = 1e-21
Identities = 166/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| |||||||| || || || ||| || ||||| || | |||
Sbjct 1282 TACAAAGTGCTGAAGCAGGTTCATCCGGATAC---TGGCATCTCGTCCAA--AG-CTATG 1335
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||| ||||| |||| || || | ||||| ||
Sbjct 1336 GGCATCATGAACTCGTTTGTCAATGACATTTTCGAACGTATTGCTGGTGAGGCGTCCCGT 1395
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | ||||||||| || ||| | | |||||||||||||| |||||||||
Sbjct 1396 CTGGCGCATTATAACAAGCGCTCTACTATCACCTCTCGCGAGATCCAGACAGCCGTGCGC 1455
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||||| |||||| |||||| || |||||||||||||
Sbjct 1456 TTGCTGCTGCCGGGCGAGTTGGCCAAGCACGCTGTGTCCGAGGGCACCA 1504
>seq72956
Length=13412
Score = 111 bits (122), Expect = 2e-18
Identities = 165/230 (72%), Gaps = 8/230 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||| ||| || | | |||| || ||| | |||
Sbjct 4621 TACAAGGTGCTGAAGCAGGTGA--CCCAGACACA----GGCATC-TCATCGAAGGCAATG 4569
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||| | ||||||||||| | || | |||| || |||||| |||
Sbjct 4568 GGCATCATGAACTCGCTGGTCAACGACATCTTTGAGCACATCCCCAGCGAGGCTTCCCGC 4509
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | |||||| | |||| |||||||||
Sbjct 4508 CTGGCGCATTACAACAAGCGCTCCACCATCACGTCCCGCGAGGTGCAGATGGCCGTGCGC 4449
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG-AGGGCACCA 725142
||| | ||| ||| || |||||| |||||| | || | |||||||||
Sbjct 4448 CTGCTGCTGCTCGGGGAGTTGGCCAAGCACGCTGGGTCGGAAGGGCACCA 4399
Score = 95.1 bits (104), Expect = 2e-13
Identities = 150/213 (70%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||| ||| |||||||||||||| | | | |||| || ||| |||||
Sbjct 1220 TACAAGGAGCTGAAGCAGGTGCACCCGACA------GAGGCATC-TCATCGAAGGCCATG 1272
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||| | || | || ||| ||| || |||||| |||
Sbjct 1273 GGCATCATGAACTCATTATTCAACAATATCGTTGAGCGCGTCGCCAGCGAGGCTCCCCGC 1332
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| || |||||| | ||| |||||| ||
Sbjct 1333 CTGGCGCATTACAACAAGCGCTGGACCATC-ACATCCGCGAGGTGCAGGTGGCCGTGGGC 1391
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCC 725126
||| | ||| || |||||||||| |||| ||
Sbjct 1392 CTGCTGCTGCCGGGGGAACTGGCCAAGCACCCC 1424
>seq122114
Length=16334
Score = 93.3 bits (102), Expect = 6e-13
Identities = 134/186 (72%), Gaps = 6/186 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||||||||| ||||||||||||| || ||| |||| || |||| ||
Sbjct 16155 ATTTACAAGGTGCTGAAGCAGGTGCACCGGGAGAC---TGG--CATC-TCATCCAAGGCC 16208
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| | ||||||||| || ||| ||||| | || ||||||| ||||||
Sbjct 16209 ATGATCACCATGAACTCCTTCGTCGCTGACATCTTTGAGCGCATCGCGGGCGAGGCGTCG 16268
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| | |||||||||| || ||| | || ||||||||||| ||||||
Sbjct 16269 CGCCTGGCGCAGTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTG 16328
Query 725091 CGCCTG 725096
||||||
Sbjct 16329 CGCCTG 16334
>seq80303
Length=5398
Score = 86.0 bits (94), Expect = 9e-11
Identities = 121/168 (72%), Gaps = 9/168 (5%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 2144 TACAAGGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 2197
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| || |||| |||||| |||
Sbjct 2198 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGGATCGCGGGCGAGGCGTCGCGC 2257
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAG 725081
||||||| | |||||||| || |||| | | |||||||||
Sbjct 2258 CTGGCGCATT---ACAAGCGCTGGACCATCGCGTCCCAAGAGATCCAG 2302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7162330680001000
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