Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_027016.1
Length=226084
Score E
Sequences producing significant alignments: (Bits) Value
seq111647 114 2e-20
>seq111647
Length=10039
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055
|||| ||||| || || || || ||||| || ||||| || | | ||| | ||| | |
Sbjct 4344 AGATAATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATCT 4403
Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115
| || || || ||| | | || || || |||| | ||| ||||||| || |
Sbjct 4404 ATCCCCCTCATGTCCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAGGTGTTTGGTCTGG 4463
Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175
|||| ||| | ||| |||| |||| || ||||| |||| || ||||| || || || |
Sbjct 4464 TGCCTGGTCTGATGATGTATGCCACGATTTGGCTCCGAGAACATAACAGAGTGTGTGATG 4523
Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223
|||| ||||||||||| || |||||| | ||||| | | |||||||||
Sbjct 4524 TGCTTAAACAAGAGCATCCAGAATGGGATGACGAGCGGTTGTTCCAGA 4571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 721889597520000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |