Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq111647 114 2e-20 >seq111647 Length=10039 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| ||||| || || || || ||||| || ||||| || | | ||| | ||| | | Sbjct 4344 AGATAATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATCT 4403 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 | || || || ||| | | || || || |||| | ||| ||||||| || | Sbjct 4404 ATCCCCCTCATGTCCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAGGTGTTTGGTCTGG 4463 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| |||| |||| || ||||| |||| || ||||| || || || | Sbjct 4464 TGCCTGGTCTGATGATGTATGCCACGATTTGGCTCCGAGAACATAACAGAGTGTGTGATG 4523 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| ||||||||||| || |||||| | ||||| | | ||||||||| Sbjct 4524 TGCTTAAACAAGAGCATCCAGAATGGGATGACGAGCGGTTGTTCCAGA 4571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721889597520000