Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq126506 89.7 7e-13 >seq126506 Length=11932 Score = 89.7 bits (98), Expect = 7e-13 Identities = 184/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC--GGGACGC 14334 ||||| ||||||||||| || ||||| ||||||||| | ||| | || || ||| || Sbjct 7564 GACACCTACAGCCCCGATGAACACCTCTGGGCCACCCTTCAGCG--TGCACCATGGATGC 7507 Query 14335 CCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394 | || | ||| ||| ||||| |||| || |||||| |||| | |||| Sbjct 7506 CTGGCTCTGTTCCCTACCACCCCAAGTTTCACACTTCAGACATGGCTGCCATTGCCAGGC 7447 Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454 | ||||||||||| ||| | || || || |||| || ||||| | || |||||| Sbjct 7446 TGGTCAAGTGGCAGTACCATGAAGGAGACATCAGTAAGGGGGCACCTTATGGACCTTGCT 7387 Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAGA 14514 || | |||| | | |||||||| | ||| | || ||| || | ||| | Sbjct 7386 CTGGAACCCACCAGCGGGGTATCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTC 7327 Query 14515 GCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 | ||| |||||||| ||||||||||| ||| Sbjct 7326 GTAACCCTCACCTGTTGGCCAACAAGTTTGAC 7295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657417604480000