Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq126506 89.7 7e-13
>seq126506
Length=11932
Score = 89.7 bits (98), Expect = 7e-13
Identities = 184/272 (68%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC--GGGACGC 14334
||||| ||||||||||| || ||||| ||||||||| | ||| | || || ||| ||
Sbjct 7564 GACACCTACAGCCCCGATGAACACCTCTGGGCCACCCTTCAGCG--TGCACCATGGATGC 7507
Query 14335 CCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394
| || | ||| ||| ||||| |||| || |||||| |||| | ||||
Sbjct 7506 CTGGCTCTGTTCCCTACCACCCCAAGTTTCACACTTCAGACATGGCTGCCATTGCCAGGC 7447
Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454
| ||||||||||| ||| | || || || |||| || ||||| | || ||||||
Sbjct 7446 TGGTCAAGTGGCAGTACCATGAAGGAGACATCAGTAAGGGGGCACCTTATGGACCTTGCT 7387
Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAGA 14514
|| | |||| | | |||||||| | ||| | || ||| || | ||| |
Sbjct 7386 CTGGAACCCACCAGCGGGGTATCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTC 7327
Query 14515 GCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
| ||| |||||||| ||||||||||| |||
Sbjct 7326 GTAACCCTCACCTGTTGGCCAACAAGTTTGAC 7295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657417604480000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |