Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 84.2 2e-11
>seq63810
Length=35167
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||| || | || || ||||| ||||| || |||||||| ||||| ||||
Sbjct 27820 GACAAAGAGGGCATCCCCCCTGACCAGCAGCGGTTGATCTTTGCCGGCAAACAGCTGGAA 27761
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998
|| | ||||| ||||||| ||||||||||| |||||| |||| |||| ||||
Sbjct 27760 GATGGACGCACTCTGTCCGACTACAACATCCAGAAAGAGTCCACTCTGCACCTGGT 27705
Score = 82.4 bits (90), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963
|| ||||| |||| || |||||||| ||||| |||| || | ||||| |||||||
Sbjct 27343 GACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGAC 27284
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||| || ||| |||| ||||| |||| |||| ||| | || ||
Sbjct 27283 TACAACATCCAGAAGGAGTCCACTCTGCATCTGGTCCTGCGCTTGAGGGGAGG 27231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355166299783500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |