Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 131 4e-25
seq48881 118 2e-21
seq5492 96.9 8e-15
seq157463 93.3 1e-13
seq33159 87.8 4e-12
seq90327 84.2 5e-11
seq12448 84.2 5e-11
>seq63810
Length=35167
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| |||||||| ||||||||||| |||| | |||
Sbjct 27693 CTGAGACGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTG 27752
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || ||| ||||| ||||| | || ||||||||| | | ||| ||
Sbjct 27753 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCC 27812
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 27813 TCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 27869
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || | ||||||||||||| ||||||
Sbjct 27870 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27913
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| ||||| || ||||||||||| |||| | |||
Sbjct 27465 CTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 27524
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || ||| ||||| ||||| | || ||||||||| | | ||| ||
Sbjct 27525 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCC 27584
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 27585 TCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 27641
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || | ||||||||||||| ||||||
Sbjct 27642 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27685
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| ||||| || ||||||||||| |||| | |||
Sbjct 27921 CTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 27980
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || ||| ||||| ||||| | || ||||||||| | | ||| ||
Sbjct 27981 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCC 28040
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 28041 TCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 28097
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || || || | |||||||| |||| |||||||
Sbjct 28098 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATT 28142
Score = 113 bits (124), Expect = 1e-19
Identities = 157/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| ||||| ||||| || ||||||||||| |||| | ||| | ||||||
Sbjct 27246 AGGACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 27305
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| ||||| ||||| | |||||||||||| | | | | || || || |||
Sbjct 27306 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGCTGCCCTCTTTGTCT 27365
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 27366 TGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 27422
Query 152070 GTTTTGCCCGT-GAGAGTCTTCACGAAGACCTGCAT 152104
| | || || ||| ||||||||||||| ||||||
Sbjct 27423 GACTGACCGGTCGAG-GTCTTCACGAAGATCTGCAT 27457
>seq48881
Length=14873
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || |||||||| ||||||||||| || | | ||| | ||||||
Sbjct 7402 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 7461
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||||||||||||| | | ||| || ||||| ||
Sbjct 7462 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 7521
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| |||| | | |||| ||| || || || || || ||
Sbjct 7522 TGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 7581
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|||||||| || ||||||||||| | ||||||||
Sbjct 7582 TTGCCCGTCAGGGTCTTCACGAAAATTTGCATTTT 7616
>seq5492
Length=9153
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| | |
Sbjct 3819 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCAC 3760
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| | || || || ||||| || || ||||| || | | |||||||||
Sbjct 3759 CCATCTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 3700
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | ||| | || | || || || || ||
Sbjct 3699 TTATCCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCAAGGGTTCAACCTCGAGGGTG 3640
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || |||||||| | |||||| ||
Sbjct 3639 ATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 3599
>seq157463
Length=7943
Score = 93.3 bits (102), Expect = 1e-13
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||||||||| |||||||| || | ||||| |
Sbjct 343 AGTCTCAACACAAGATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAAAGTACGT 402
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| | || ||||| | | | |||||||||
Sbjct 403 CCATCTTCCAGCTGCTTGCCAGCAAAGATCGGTCTTTGCTGAGCAGGAGGAATTCCTTCC 462
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || | || || | | | |||| | | || || || ||||||||
Sbjct 463 TTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAACCTCAAGAGTG 522
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || | |||||||| | |||||| ||
Sbjct 523 ATGGTCTTCCCAGTAAGGATTTTCACGAAAAGCTGCATCTT 563
>seq33159
Length=15523
Score = 87.8 bits (96), Expect = 4e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | | ||| |
Sbjct 2101 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGCAT 2160
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || | | | || | | ||| |||||
Sbjct 2161 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACAGATCAGGAGGAATTTCTTCC 2220
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | ||||| || || || || ||
Sbjct 2221 TTATCCTGTATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTG 2280
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || ||||| || | |||||| ||
Sbjct 2281 ATGGTCTTCCCAGTAAGGGTTTTCACAAAAATCTGCATCTT 2321
>seq90327
Length=63722
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958
||||||||||| ||||| |||| |||||||| || | || || | |||||||| ||
Sbjct 54690 AGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGACAAGGTACATCCATCTTCCAGT 54631
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|| || || ||| | || || ||||| || | | ||||||||||| || || ||
Sbjct 54630 TGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 54571
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| ||| ||| | ||| | ||||| || || |||||||| || || || ||
Sbjct 54570 TTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCG 54511
Query 152079 GTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| | || | || ||| | |||||| ||
Sbjct 54510 GTATGGGTTTCCATGAAAATCTGCATCTT 54482
>seq12448
Length=17785
Score = 84.2 bits (92), Expect = 5e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||||||||| || ||||| | ||| ||||| || || | | ||| |
Sbjct 3325 AGTCTCAACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCAT 3384
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || ||||| | | | ||||||||
Sbjct 3385 CCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCT 3444
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || ||| ||| | |||| | || || || || || || ||
Sbjct 3445 TTATCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 3504
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || |||||||| | |||||| ||
Sbjct 3505 ATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 3545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151448075695500
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