Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 159 8e-34
seq12448 158 3e-33
seq48881 150 4e-31
seq33159 145 2e-29
seq5492 140 8e-28
seq157463 129 1e-24
seq159105 118 3e-21
seq102059 100 7e-16
seq32806 98.7 2e-15
seq66463 93.3 1e-13
seq89363 86.0 2e-11
>seq63810
Length=35167
Score = 159 bits (176), Expect = 8e-34
Identities = 169/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 27910 CAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 27853
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| || |||||||| || ||||| || |||||||
Sbjct 27852 ACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAGC 27793
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| ||||| |||||||| ||||||||| | ||||| |||| || |||
Sbjct 27792 AGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAACA 27733
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| ||||| || || ||||| || || | | ||||||
Sbjct 27732 TCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGTCTCAGA 27692
Score = 154 bits (170), Expect = 4e-32
Identities = 168/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 27682 CAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 27625
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| || |||||||| || ||||| || |||||||
Sbjct 27624 ACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAGC 27565
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| ||||| |||||||| ||||||||| | ||||| |||| || |||
Sbjct 27564 AGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAACA 27505
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 27504 TCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGTCTCAGA 27464
Score = 150 bits (166), Expect = 4e-31
Identities = 167/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| |||||||| || |||
Sbjct 28138 CAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 28081
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| || |||||||| || ||||| || |||||||
Sbjct 28080 ACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAGC 28021
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| ||||| |||||||| ||||||||| | ||||| |||| || |||
Sbjct 28020 AGCGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAACA 27961
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 27960 TCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGTCTCAGA 27920
Score = 140 bits (154), Expect = 8e-28
Identities = 159/209 (76%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTC-ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG- 177981
|| || |||||||| || ||| || || | | |||||||| |||||||| || |||
Sbjct 27454 CAGATCTTCGTGAAGAC-CTCGACCGGTCAGTCCATCACCCTGGAGGTGGA--GCCCAGT 27398
Query 177982 -ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||||| ||||| ||||| || |||||||| || | ||| || ||||||
Sbjct 27397 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCAGCCCCCCTGACCAG 27338
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | | ||||| ||||| |||||||| ||||||||| | ||||| |||| || |||
Sbjct 27337 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACTCTGTCCGACTACAAC 27278
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || |||||||| ||
Sbjct 27277 ATCCAGAAGGAGTCCACTCTGCATCTGGT 27249
>seq12448
Length=17785
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||||||||| ||| ||| ||
Sbjct 3539 CAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGAT 3480
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||||| ||||| ||||||||||| ||||| | ||||||
Sbjct 3479 ACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTAATCAGCAA 3420
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | | || || ||| |
Sbjct 3419 AGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTAAAACATT 3360
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||| | || || || || |||||||| ||||||||
Sbjct 3359 CAACAGGAGTCCACCCTTCATCTTGTGTTGAGACT 3325
>seq48881
Length=14873
Score = 150 bits (166), Expect = 4e-31
Identities = 168/222 (76%), Gaps = 7/222 (3%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| ||||||||||||| || || || || || || |||||||| ||||
Sbjct 7621 AGGTCAAAATGC---AAATTTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGG 7565
Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
||| ||| || |||||||| ||||| || || ||||| ||||| || || || ||
Sbjct 7564 TGG--AGCCCAGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 7507
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 7506 CCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 7447
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| | || || ||| |||| ||||| || || ||||| || ||
Sbjct 7446 TTCTGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 7405
>seq33159
Length=15523
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| || || || || || |||||||||||||| ||| ||||||
Sbjct 2315 CAGATTTTTGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCAGAT 2256
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| ||||| || |||| ||| ||||| || | | ||
Sbjct 2255 ACAATAGAAAATGTAAAGGCCAAGATACAGGATAAGGAAGAAATTCCTCCTGATCTGTAA 2196
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | | || || ||| |
Sbjct 2195 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTACAACATT 2136
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 2135 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 2101
>seq5492
Length=9153
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||||||||| ||| || ||
Sbjct 3605 CAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTTGGAT 3664
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| | || || || || ||||| ||||| || |||||||| ||||| || ||||||
Sbjct 3665 ACAAAAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 3724
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || | |||||||| | ||| | | || || ||| |
Sbjct 3725 AGACTGATCTTTGCTGGCAAGCAACGGGAAGATGGGTGCACTTTGTCTGACTACAACATT 3784
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 3785 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 3819
>seq157463
Length=7943
Score = 129 bits (142), Expect = 1e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987
|||||||||||| || || || || || ||||| || ||||| ||| ||| | || |
Sbjct 553 TTTTCGTGAAAATCCTTACTGGGAAGACCATCACTCTTGAGGTTGAACCCTCGGGTACAA 494
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
| || || | || |||| ||||| || |||||||| ||||| | |||||| |||
Sbjct 493 TAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGCTCAGCAAAGAC 434
Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107
||||| || || || ||||| ||||||||| | ||| | | || || ||| | ||||
Sbjct 433 CGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACATTCAAA 374
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|||| || || || |||||||| ||||||||
Sbjct 373 AAGAGTCCACTCTTCATCTTGTGTTGAGACT 343
>seq159105
Length=10725
Score = 118 bits (130), Expect = 3e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| || || | ||||| |||||||||||||| ||| ||| ||
Sbjct 5853 CAGATTTTTGTGAAAACCCTTACTAGGAAAACAATCACCCTCGAGGTTGAACCCTCGGAT 5794
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || | || |||||| ||||| || |||||||| |||| | |||||
Sbjct 5793 ACAATAGAAAATATAAAGACAAAGATCCAGGATAAGGAAGGAATTGCTCCTGGTTAGCAA 5734
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| | ||| || || || || | |||| |||| | ||| | | || || ||| |
Sbjct 5733 AGACTGAGCTTTGCTGGCAAGCAAGTGGAAGCTGGATGCACTTTGTCTGACTACAACATT 5674
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| ||| || || | || |||||||| ||||||||
Sbjct 5673 CCAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 5639
>seq102059
Length=16704
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||||||||| ||||| ||||| || |||||||| || ||||| || ||||||
Sbjct 6153 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 6094
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | ||||| || || |||||||| ||||||||| | ||||| |||| || |||
Sbjct 6093 CAGAGGTAGATCTTTGCTGGGAAACAGCTGGAAGATGGATGCACTCTGTCCGACTACAAC 6034
Query 178101 GTCCAAAAAGAATCAACACTGCA 178123
||| || | || || |||||
Sbjct 6033 ACCCAGAAGAAGTCCACTCTGCA 6011
>seq32806
Length=18495
Score = 98.7 bits (108), Expect = 2e-15
Identities = 148/207 (71%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || || ||||| || || ||||| || || ||||| |||||||||| ||| || |
Sbjct 13405 CACATCTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTGG--AGCCCAGTG 13462
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| || || ||||| |||||| || | || || || || || ||||| || |||||||
Sbjct 13463 ATACTATTGAGAATGTCAAAGCTAAAACCCAAGATAAGGAGGGCATCCCACCTGACCAGC 13522
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | | || ||| | |||||||| || ||||| | ||||| | || || ||
Sbjct 13523 AGCGTCGGACTTTTGCCAGCAAACAGCTGGACGATGGCCGCACTCTCTCAGACTAAAATA 13582
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
|||| ||||| | || ||||| ||||
Sbjct 13583 TCCAGAAAGAGTTCACTCTGCA-CTTG 13608
>seq66463
Length=18175
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAA-AACGATCACCCTCGAGGTGGAAAGCTCAGA 177982
|| |||||||||||||| || || || || ||| ||||| || |||| ||| || ||
Sbjct 9630 CAGATTTTCGTGAAAACCCTTACTGGGAAGAACCATCACTCTGGAGGCTGAACCCTTGGA 9689
Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| || || || || || ||||| | ||| ||||||||||| ||||| | |||||
Sbjct 9690 TACAATAGAAAATGTAAAGGCCAAGATCCGGGATAAAGAAGGAATTCCTCCTGCTCAGCA 9749
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
| | || | ||| || || || || || |||| |||| | ||| | | ||| ||| |
Sbjct 9750 AAGGCTGAGCTTTGCTGGCAAGCAACTGGAAGGTGGACGTACTTT----GGTTACAACAT 9805
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| ||| || || || | | |||||| |||||||
Sbjct 9806 TCCAAAGGAGTCCAC-TTTCGTCTTGTGCTGAGACT 9840
>seq89363
Length=18264
Score = 86.0 bits (94), Expect = 2e-11
Identities = 146/207 (71%), Gaps = 10/207 (5%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || | || || || || |||||||| || || |||
Sbjct 15992 CAGATCTTTGTGAAGACCCTGATGGGCAAGACCATA---CTCGAGGTCGA--GCCCAGTG 15938
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||| ||||||||||| || || || ||||| || || ||||| | |||||||
Sbjct 15937 ACACCACTGAGAACGTCAACGCTAAAATCCAAGACAAGGAGGGCATCCCATCTGACCAGC 15878
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| ||||| | || | || |||||||| || ||||| ||||| ||||||||
Sbjct 15877 AGCGACTGCTTTTTGAGGGCAAACAGCTGGAGGATGG--CCACTCTCTTAGATTATAATA 15820
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
|||| ||||| || || ||||| ||||
Sbjct 15819 TCCAGAAAGAGTCCACTCTGCA-CTTG 15794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201255839637000
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