Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq17446 84.2 2e-11
seq671 84.2 2e-11
>seq17446
Length=585
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| ||||||||| | || ||||||||| || || || ||||| || || ||| |||||
Sbjct 15 GACAAAGAAGGTATACCACCAGATCAACAGAGGCTGATATTTGCCGGAAAGCAACTGGAA 74
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||| | ||| | || |||||||| ||||| || || |||||||||||| | || ||
Sbjct 75 GATGGCCGAACCCTAGCGGATTACAACATTCAGAAAGAGTCTACTCTTCACCTCGTCTT 133
>seq671
Length=818080
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| ||||| | || | ||| |||||||| |||||||| ||||| || |||||
Sbjct 168509 GATAAGGAAGGAATTCCTCCTGCTCAGCAAAGACTGATCTTTGCTGGCAAGCAGCTGGAA 168568
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|||| ||| || | || ||||| ||||||||||| || |||||||| |||||||
Sbjct 168569 GATTGATGTACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTGGTGTT 168627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410479187190746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |