Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq273 152 5e-32
seq475 150 2e-31
seq29432 149 6e-31
seq21504 132 5e-26
seq683 132 5e-26
seq10281 131 2e-25
seq342 118 1e-21
seq188 109 6e-19
seq19201 105 7e-18
seq152 104 2e-17
seq40511 102 8e-17
seq25626 102 8e-17
seq94 95.1 1e-14
seq123 93.3 4e-14
seq31 91.5 2e-13
seq48301 87.8 2e-12
seq58060 86.0 6e-12
seq322 84.2 2e-11
seq139 82.4 8e-11
seq56 82.4 8e-11
seq51 82.4 8e-11
>seq273
Length=4066651
Score = 152 bits (168), Expect = 5e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || || || | || || || ||||||||| | || || || |||
Sbjct 887416 AATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 887357
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||||| || || | |||||||||||||||||| | |||||
Sbjct 887356 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCA 887297
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| || ||||||||| |||| |||| |||||||| |||||||||
Sbjct 887296 GCAGAGGTTGATCTTTGCCGGCAAACAGTTGGAAGACGGACGCACCCTGTCCGACTACAA 887237
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922
||||||||| ||| |||| ||||| || || ||||||||||||| || | |||
Sbjct 887236 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGGGGAGGTGTCTT 887183
>seq475
Length=1570329
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
||||||||||| ||||| || || || || ||||| ||||||||| | || || || ||
Sbjct 1255877 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 1255936
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| ||||| | | | | | |||| || || | || || |||||||||||| | |||
Sbjct 1255937 AGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 1255996
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | ||||||| |||||||| |||||||| || | ||||| || ||||||
Sbjct 1255997 CAGCAGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 1256056
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| ||| | || ||||| || || |||| ||||||| |||
Sbjct 1256057 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGGC 1256107
>seq29432
Length=351
Score = 149 bits (164), Expect = 6e-31
Identities = 165/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 40683 CCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 40742
|| ||| ||||| || ||||| ||||| || || ||||| ||||||||| |||| |||||
Sbjct 345 CCCAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGA 286
Query 40743 AGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC 40802
|| | |||| | | | | |||||| || || | |||||||| || ||||| |
Sbjct 285 GTCCTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCC 226
Query 40803 GGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 40862
||| ||||| ||| | |||| ||| || |||||||| || |||| ||| || | ||
Sbjct 225 GGATCAGCAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGACGGGCGTACTTTGGCTGA 166
Query 40863 CTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
||||||||||||||| || ||||||| ||||| ||||||
Sbjct 165 CTACAACATCCAGAAAGAATCCACGCTTCATCTTGTGTTG 126
>seq21504
Length=484
Score = 132 bits (146), Expect = 5e-26
Identities = 146/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || |||||| |||| || || | |
Sbjct 243 ATGCAAATCTTCGTCAAGACCCTTACAGGCAAGACTATCACCCTCGAAGTGGAGAGCTCT 302
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | || | ||||||| ||||| ||||||||||| |||||||
Sbjct 303 GACACCATTGATAACG-TGAAAGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGACCA 361
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| ||||| || || | ||||| | |||||||||
Sbjct 362 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTTTGGCCGACTACAA 421
Query 40869 CATCCAGAAGGA 40880
||||||||||||
Sbjct 422 CATCCAGAAGGA 433
Score = 91.5 bits (100), Expect = 2e-13
Identities = 156/224 (70%), Gaps = 18/224 (8%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA-AGC--- 40745
||||| || ||||| || || ||||| || || || |||||| |||| || || |||
Sbjct 15 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACCCTCGAGGTGGAGAGCTCC 74
Query 40746 --CAC---CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800
||| ||||| |||| |||| |||| || | ||||| || ||||||||
Sbjct 75 GACACTATCGACAACGTGAAAAC---CAAG------ATACAGGACAAGGAAGGCATCCCA 125
Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860
||||||||||| | | |||| ||| || || || || || || | || || ||
Sbjct 126 CCGGACCAGCAAAGGTTAATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACTCTTGCT 185
Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||||||| ||| | || || || | || |||||
Sbjct 186 GACTACAACATCCAGAAAGAGTCAACACTTCACTTGGTCTTGCG 229
>seq683
Length=758919
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || |||||||| |||||||| |||| ||| | |||
Sbjct 117351 ATGCAGATCTTTGTGAAAACCCTGACGGGCAAGACCATCACACTCGAGGTCAAGCCCAGT 117292
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| |||| | ||||| | ||||| ||||||||||| | ||||||
Sbjct 117291 GACACTATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 117232
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | ||||||||||||||||| || | ||||| ||| ||||| |||
Sbjct 117231 CAGCATCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAC 117172
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||| ||| |||| |||||
Sbjct 117171 ATCCAGAAAGAGTCCACTCTGCA 117149
>seq10281
Length=966
Score = 131 bits (144), Expect = 2e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || ||||| || || |||||| |||| ||||| | ||
Sbjct 263 ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCTCC 322
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| ||| | |||| |||||| ||||||| || || ||||| || || |||||||
Sbjct 323 GACACCGTCGACAACG-TCAAGGCTAAAATTCAAGATAAGGAGGGTATACCACCGGACCA 381
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | | |||| || || || ||||| || || | || || || ||||||||
Sbjct 382 GCAAAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGGACTCTTGCTGACTACAA 441
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||||||||| | || || ||||| |||
Sbjct 442 CATCCAGAAGGAGTCGACACTTCATCTCGTG 472
Score = 109 bits (120), Expect = 6e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| | ||| | || || ||||| || || || |||||| |||| || ||| |
Sbjct 32 AAGATGCAGACCTTCATTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGC 91
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||| | | | |||| | ||| || | | | || || || |||||||| ||||
Sbjct 92 TCTGACACCATCGACAACGTTAAAGTCAAGA-TCCAGGATAAGGAAGGCATCCCGCCGGA 150
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | || |||| ||| ||||||||||| || |||| || || | ||||||
Sbjct 151 CCAGCAGAGGCTTATCTTCGCCGGCAAACAGCTCGAAGACGGCCGAACTTTGGCCGACTA 210
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| ||| ||||||| ||
Sbjct 211 CAACATCCAGAAAGAGTCCACGCTCCA 237
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || ||||| || |||||||| | || ||||| |
Sbjct 719 ATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACCATCACTCTGGAGGTCGAGAGTTCT 778
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| |||||| ||||| | |||||||| || ||||| |||||||
Sbjct 779 GATACTATCGACAACG-TCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCGGACCA 837
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || || ||||| || || | ||||| | ||||||||
Sbjct 838 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 897
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||| ||| | || || ||
Sbjct 898 CATCCAGAAAGAGTCGACCCTCCA 921
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| | ||||| || || || || | || || || | |
Sbjct 491 ATGCAAATCTTTGTTAAAACCTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCT 550
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | || | ||||| | |||||||| |||||||| |||| ||
Sbjct 551 GATACCATCGACAACG-TGAAAGCCAAAATCCAAGACAAAGAAGGCATCCCACCGGATCA 609
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| || || || ||||| || |||| || || | ||||||||
Sbjct 610 GCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGACGGCCGGACTTTGGCTGACTACAA 669
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||| | ||||| || | || |||||
Sbjct 670 CATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCG 705
>seq342
Length=1079620
Score = 118 bits (130), Expect = 1e-21
Identities = 121/157 (77%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825
|||||| ||||| | |||||||||||||||||| | |||||||| | ||| |
Sbjct 689996 TCAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAGCAGAGGTAGCTCTTTG 690055
Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885
| || ||||||||||| || | ||||| || | |||||||||||||||||||| |||
Sbjct 690056 CTGGGAAACAGCTGGAAGATGGACGCACTCTGTCCAACTACAACATCCAGAAGGAGTCCA 690115
Query 40886 CGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922
| ||||| || || ||||||||||||| || | |||
Sbjct 690116 CTCTGCA-CTGGTCCTGCGCTTGAGGGGAGGTGTCTT 690151
>seq188
Length=3215107
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| |||||||| | || ||| | |||
Sbjct 2830744 ATGCAGATCTTTGTGAAGACCCTAACAGGCAAGACCATCACACTTGAGGTCAAGCCCAAT 2830803
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||| | ||||| | |||| ||||||||||| | ||||||
Sbjct 2830804 GACACTATTGAGAATGTCAAAGCTAAAATCCAAAACAAGGAGGGCATCCCACCTGACCAG 2830863
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||||||||||||||||| || | ||||| ||| ||||| ||
Sbjct 2830864 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAT 2830923
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||| ||| |||| |||||
Sbjct 2830924 ATCCAGAAAGAGTCCACTCTGCA 2830946
>seq19201
Length=536
Score = 105 bits (116), Expect = 7e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || || || ||||| || ||||| || || || ||| | || || ||| |
Sbjct 508 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCG 449
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | |||| || || | ||||| || || ||||| ||||
Sbjct 448 TCCGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCACCGGAT 389
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || || | |||||| || |||||||| |||| | || ||| || |||
Sbjct 388 CAGCAGCGGCTGATATTCGCGGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGATTAC 329
Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||||| | ||||| ||
Sbjct 328 AACATCCAGAAGGAGTCGACGCTTCA 303
>seq152
Length=4697258
Score = 104 bits (114), Expect = 2e-17
Identities = 142/196 (72%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
|||| || || || || || || |||||| |||||| | |||| | ||| ||| |
Sbjct 3920108 TGCAGATCTTTGTGAAGACCCTTGTGGGCAAGACCATCCCACTCGAGGCCGAGCCCAGTG 3920049
Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810
||| | | ||||| ||| | ||||| | ||||| ||||||||||| | |||||||
Sbjct 3920048 ACACTGAG--AACGC-CAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAGC 3919992
Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870
| | || || | |||||||| |||||||| || | |||| ||| ||||| ||||
Sbjct 3919991 AGCATCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCTGCACTCTCTCCGACTCTAACA 3919932
Query 40871 TCCAGAAGGAGGCCAC 40886
||||||||||| ||||
Sbjct 3919931 TCCAGAAGGAGTCCAC 3919916
>seq40511
Length=266
Score = 102 bits (112), Expect = 8e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AAC 40763
|| || ||||| || || || ||||| |||| || ||| | | |||| | | |||
Sbjct 1 AAGACTCTCACCGGAAAGACGATCACACTCGAGGTGGAAAGCTCTGACACGATAGACAAC 60
Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823
| |||||| ||||| | ||||| ||||| ||||| |||||||||| | || || |
Sbjct 61 G-TCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCGGACCAGCAGAGGCTGATTTT 119
Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883
||| || || || || || |||| || || ||| ||||||||||||||||||||| |
Sbjct 120 CGCCGGAAAGCAACTCGAGGACGGCCGAACTCTCGCTGACTACAACATCCAGAAGGAGTC 179
Query 40884 CACGCTGCATCTAGT 40898
|| || ||||| ||
Sbjct 180 GACCCTTCATCTCGT 194
>seq25626
Length=405
Score = 102 bits (112), Expect = 8e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || || || || | || || || | |
Sbjct 130 ATGCAGATCTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAGGTTGAGAGCTCA 189
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || |||| ||||| ||||| || || |||||||
Sbjct 190 GACACCATTGATAACG-TCAAGGCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 248
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || ||||| || |||| |||||| | |||||||||
Sbjct 249 GCAGAGATTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTACAA 308
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||||||| | || | ||||| ||
Sbjct 309 CATTCAGAAGGAGTCGACTTTACATCTTGT 338
>seq94
Length=5588587
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| |||||||| |||| ||||| |||
Sbjct 3280253 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTCGAGCCCAGT 3280312
Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || || | |||| | ||| | | |||| ||||||||||| | |||||
Sbjct 3280313 GACACTACTGAGAATG-TCAAAGCTAAAGTCCAACACAAGGAGGGCATCCCACCTGACCA 3280371
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | || ||||||||| |||| || | |||| ||| ||||| ||
Sbjct 3280372 GCATCGTCTGATTTTTGCCGGCAAACAGATGGAGGATGGCTGCACTCTCTCAGACTAAAA 3280431
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||| ||| |||| |||||
Sbjct 3280432 TGTCCAGAAAGAGTCCACTCTGCA 3280455
>seq123
Length=7988377
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/207 (71%), Gaps = 14/207 (7%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || |||||||| |||||||| | || ||| |||||
Sbjct 4705976 ATGCAGATCTT-GTGAAGACCCTGACGGGCAAGACCATCACACTAGAGGTC-AAGCCCGT 4706033
Query 40750 GACAG-CGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| |||| || |||| | ||||| | | ||| ||||||||||| |||||||
Sbjct 4706034 GACACTCGTGAGAAG--TCAAAGCTAAAATCCAAGGCAAGGAGGGCATCCCACCGGACCA 4706091
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGA-------CGAGCGCACCCTCAACG 40861
|| || || || | ||||||||||||||||| || || ||||| ||| ||
Sbjct 4706092 GCGGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGAGGATGGCCGGCCGCACTCTC--CG 4706149
Query 40862 ACTACAACATCCAGAAGGAGGCCACGC 40888
|| ||||||||||| ||| || |||
Sbjct 4706150 TCTGTAACATCCAGAACGAGTCCCCGC 4706176
>seq31
Length=7567003
Score = 91.5 bits (100), Expect = 2e-13
Identities = 145/204 (71%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || |||| || ||| |||||||| |||| ||| | |||
Sbjct 4143163 ATGCAGATCTT-GTGAAGACCCTCATGGACAAGACCATCACACTCGAGGTCAAGCCCAGT 4143221
Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || || | ||| | ||||| | ||||| |||||||||| | |||||
Sbjct 4143222 GACACTACTGAGAATG-TCAGAGCTAAAATCCAAGACAAGAAGGGCATCCCGCCTGACCA 4143280
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || || | || |||||||||||||| || | | ||| ||| ||||| ||
Sbjct 4143281 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCACACTCTCTCAGACTATAA 4143340
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||||| ||| |||| |||||
Sbjct 4143341 TATCCAGAAAGAGTCCACTCTGCA 4143364
>seq48301
Length=236
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || | || || || |||||||| | || || || | |||| | |
Sbjct 1 TTCGTTAAGACATTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTCCGATACTATT 60
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||| | || || | ||||| || || || ||| ||||||||||||| ||
Sbjct 61 GACAACG-TCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAGCAACGTCT 119
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
||||| ||| || || ||||| || || | ||||| | |||||||||||||||||
Sbjct 120 CATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTGGCTGACTACAACATCCAGAA 179
Query 40878 GGAGGCCACGCTGCA 40892
|||| | || || ||
Sbjct 180 GGAGTCGACCCTTCA 194
>seq58060
Length=210
Score = 86.0 bits (94), Expect = 6e-12
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 40723 ACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCT 40781
|| |||||| | || || || | |||||| | | | |||| | |||| || || |
Sbjct 1 ACTATCACCTTGGAAGTGGAGAGCTCCGACACCATTGATAACGTT-AAGGCTAAGATCCA 59
Query 40782 CGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGA 40841
||||| || |||||||| |||||||||| || ||||||| ||| || || ||||| ||
Sbjct 60 GGACAAGGAAGGCATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGA 119
Query 40842 CGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||| ||||| | ||||||||||| ||||| ||| | || || ||
Sbjct 120 GGACGGTCGCACTTTGGCTGACTACAACATTCAGAAAGAGTCGACCCTTCA 170
>seq322
Length=1509210
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/202 (71%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751
||| || || || || || || | |||||| |||||||| |||| ||||| ||| ||
Sbjct 334658 GCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATCAC--TCGAGGTCGAGCCCAGTGA 334601
Query 40752 CAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810
|| | || || | |||| | ||||| | ||||| ||||||||||| |||||||
Sbjct 334600 CACCACTGAGAATG-TCAATGCTAAAATCCAAGACAAGGAGGGCATCCCACTTGACCAGC 334542
Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870
| | || ||| | |||||||||||||| || | | ||| ||| |||| || |
Sbjct 334541 A--GTCTGCTCTTTGAAGGCAAACAGCTGGAGGATGGCCACACTCTCTTAGACTGTAATA 334484
Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892
|||||| ||| |||| |||||
Sbjct 334483 TCCAGA--GAGTCCACTCTGCA 334464
>seq139
Length=2073065
Score = 82.4 bits (90), Expect = 8e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| | || | ||| || | |||||||| |||||| | || | ||| |||
Sbjct 453256 ATGCAGAGCTTTGGAAAGACCCCGACGGGCAAGACCATCGCATTCAAGGTCCGGCCCAGG 453197
Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || || | |||| | ||||| | ||||| ||||||||||| | |||||
Sbjct 453196 GACACTACTGAGAATG-TCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 453138
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || || | |||||| || ||||||| || | |||| ||| | | | ||
Sbjct 453137 GCGGCGTCTGATTTTTGCGGGCTAATAGCTGGAGGATGGCAGCACTCTCTCAGGCGATAA 453078
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920
|||||||| | | |||| |||||| | ||| | || || ||||| |||||
Sbjct 453077 TATCCAGAAAGCGTCCACTCTGCATTTGGTGCTTCGTCTGTGGGGCAGCGGC 453026
>seq56
Length=7808877
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || | || || || | |||||| ||||||||| | || ||||| ||
Sbjct 4819307 ATGCAGATCTTTGGGAAGACCCTGAGGGGCAAGACCATCACCCTGGAGGTCGAGCTCAGT 4819366
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | || | | |||| | ||| | || || ||||||||||| |||||||
Sbjct 4819367 GACACCATGGAGAATGTCAAAGCTCTAATCCAAGATAAGGAGGGCATCCCACGGGACCAG 4819426
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || | | || ||||| |||||||| || | ||||| | | |||| |||
Sbjct 4819427 CAGCATCTGGTTTTTGCAGGCAACCAGCTGGAGGATGGCCGCACTCACTTAGACTCTAAC 4819486
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
| |||||| | | |||| ||||| | ||| ||| || ||||| ||
Sbjct 4819487 AGCCAGAAAGGGTCCACCCTGCACTTGGTGCCTCGCCTGTGGGGCAGC 4819534
>seq51
Length=16196278
Score = 82.4 bits (90), Expect = 8e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || |||| || |||||||| | || ||||| |||
Sbjct 11819457 ATGCAGATCTTTGTGAAGACCCTGACGGTGAAGACCATCACACTTGAGGTCGAGCCCAGT 11819398
Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || | | |||| | ||||| | ||||| | ||||||||| | |||||
Sbjct 11819397 GACACTACTGAGGATG-TCAAAGCTAAAATCCAAGACAAGGCGGGCATCCCACCTGACCA 11819339
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || || | || |||||||||||||| || | |||| ||| ||||| |
Sbjct 11819338 GCAGTGTCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTATGA 11819279
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||| ||| |||| |||||
Sbjct 11819278 TATCCAGAGAGAGTCCACTCTGCA 11819255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514810637614640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |