Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq273 152 5e-32 seq475 150 2e-31 seq29432 149 6e-31 seq21504 132 5e-26 seq683 132 5e-26 seq10281 131 2e-25 seq342 118 1e-21 seq188 109 6e-19 seq19201 105 7e-18 seq152 104 2e-17 seq40511 102 8e-17 seq25626 102 8e-17 seq94 95.1 1e-14 seq123 93.3 4e-14 seq31 91.5 2e-13 seq48301 87.8 2e-12 seq58060 86.0 6e-12 seq322 84.2 2e-11 seq139 82.4 8e-11 seq56 82.4 8e-11 seq51 82.4 8e-11 >seq273 Length=4066651 Score = 152 bits (168), Expect = 5e-32 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || | || || || ||||||||| | || || || ||| Sbjct 887416 AATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 887357 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| || || | |||||||||||||||||| | ||||| Sbjct 887356 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCA 887297 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || ||||||||| |||| |||| |||||||| ||||||||| Sbjct 887296 GCAGAGGTTGATCTTTGCCGGCAAACAGTTGGAAGACGGACGCACCCTGTCCGACTACAA 887237 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922 ||||||||| ||| |||| ||||| || || ||||||||||||| || | ||| Sbjct 887236 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGGGGAGGTGTCTT 887183 >seq475 Length=1570329 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || || ||||| ||||||||| | || || || || Sbjct 1255877 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 1255936 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | | |||| || || | || || |||||||||||| | ||| Sbjct 1255937 AGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 1255996 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| |||||||| |||||||| || | ||||| || |||||| Sbjct 1255997 CAGCAGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 1256056 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| | || ||||| || || |||| ||||||| ||| Sbjct 1256057 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGGC 1256107 >seq29432 Length=351 Score = 149 bits (164), Expect = 6e-31 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 40683 CCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 40742 || ||| ||||| || ||||| ||||| || || ||||| ||||||||| |||| ||||| Sbjct 345 CCCAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGA 286 Query 40743 AGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC 40802 || | |||| | | | | |||||| || || | |||||||| || ||||| | Sbjct 285 GTCCTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCC 226 Query 40803 GGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 40862 ||| ||||| ||| | |||| ||| || |||||||| || |||| ||| || | || Sbjct 225 GGATCAGCAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGACGGGCGTACTTTGGCTGA 166 Query 40863 CTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||||||||||||| || ||||||| ||||| |||||| Sbjct 165 CTACAACATCCAGAAAGAATCCACGCTTCATCTTGTGTTG 126 >seq21504 Length=484 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || |||||| |||| || || | | Sbjct 243 ATGCAAATCTTCGTCAAGACCCTTACAGGCAAGACTATCACCCTCGAAGTGGAGAGCTCT 302 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | ||||||| ||||| ||||||||||| ||||||| Sbjct 303 GACACCATTGATAACG-TGAAAGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGACCA 361 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || || | ||||| | ||||||||| Sbjct 362 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTTTGGCCGACTACAA 421 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 422 CATCCAGAAGGA 433 Score = 91.5 bits (100), Expect = 2e-13 Identities = 156/224 (70%), Gaps = 18/224 (8%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA-AGC--- 40745 ||||| || ||||| || || ||||| || || || |||||| |||| || || ||| Sbjct 15 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACCCTCGAGGTGGAGAGCTCC 74 Query 40746 --CAC---CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800 ||| ||||| |||| |||| |||| || | ||||| || |||||||| Sbjct 75 GACACTATCGACAACGTGAAAAC---CAAG------ATACAGGACAAGGAAGGCATCCCA 125 Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860 ||||||||||| | | |||| ||| || || || || || || | || || || Sbjct 126 CCGGACCAGCAAAGGTTAATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACTCTTGCT 185 Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||||||| ||| | || || || | || ||||| Sbjct 186 GACTACAACATCCAGAAAGAGTCAACACTTCACTTGGTCTTGCG 229 >seq683 Length=758919 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || |||||||| |||||||| |||| ||| | ||| Sbjct 117351 ATGCAGATCTTTGTGAAAACCCTGACGGGCAAGACCATCACACTCGAGGTCAAGCCCAGT 117292 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | ||||| | ||||| ||||||||||| | |||||| Sbjct 117291 GACACTATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 117232 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | ||||||||||||||||| || | ||||| ||| ||||| ||| Sbjct 117231 CAGCATCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAC 117172 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| |||| ||||| Sbjct 117171 ATCCAGAAAGAGTCCACTCTGCA 117149 >seq10281 Length=966 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| || || |||||| |||| ||||| | || Sbjct 263 ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCTCC 322 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| ||| | |||| |||||| ||||||| || || ||||| || || ||||||| Sbjct 323 GACACCGTCGACAACG-TCAAGGCTAAAATTCAAGATAAGGAGGGTATACCACCGGACCA 381 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| || || || ||||| || || | || || || |||||||| Sbjct 382 GCAAAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGGACTCTTGCTGACTACAA 441 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||||| ||| Sbjct 442 CATCCAGAAGGAGTCGACACTTCATCTCGTG 472 Score = 109 bits (120), Expect = 6e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| | ||| | || || ||||| || || || |||||| |||| || ||| | Sbjct 32 AAGATGCAGACCTTCATTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGC 91 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | ||| || | | | || || || |||||||| |||| Sbjct 92 TCTGACACCATCGACAACGTTAAAGTCAAGA-TCCAGGATAAGGAAGGCATCCCGCCGGA 150 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| ||| ||||||||||| || |||| || || | |||||| Sbjct 151 CCAGCAGAGGCTTATCTTCGCCGGCAAACAGCTCGAAGACGGCCGAACTTTGGCCGACTA 210 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| ||||||| || Sbjct 211 CAACATCCAGAAAGAGTCCACGCTCCA 237 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || |||||||| | || ||||| | Sbjct 719 ATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACCATCACTCTGGAGGTCGAGAGTTCT 778 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| ||||| | |||||||| || ||||| ||||||| Sbjct 779 GATACTATCGACAACG-TCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCGGACCA 837 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | ||||| | |||||||| Sbjct 838 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 897 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| | || || || Sbjct 898 CATCCAGAAAGAGTCGACCCTCCA 921 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| | ||||| || || || || | || || || | | Sbjct 491 ATGCAAATCTTTGTTAAAACCTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCT 550 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | || | ||||| | |||||||| |||||||| |||| || Sbjct 551 GATACCATCGACAACG-TGAAAGCCAAAATCCAAGACAAAGAAGGCATCCCACCGGATCA 609 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || ||||| || |||| || || | |||||||| Sbjct 610 GCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGACGGCCGGACTTTGGCTGACTACAA 669 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| || | || ||||| Sbjct 670 CATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCG 705 >seq342 Length=1079620 Score = 118 bits (130), Expect = 1e-21 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| ||||| | |||||||||||||||||| | |||||||| | ||| | Sbjct 689996 TCAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAGCAGAGGTAGCTCTTTG 690055 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | || ||||||||||| || | ||||| || | |||||||||||||||||||| ||| Sbjct 690056 CTGGGAAACAGCTGGAAGATGGACGCACTCTGTCCAACTACAACATCCAGAAGGAGTCCA 690115 Query 40886 CGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922 | ||||| || || ||||||||||||| || | ||| Sbjct 690116 CTCTGCA-CTGGTCCTGCGCTTGAGGGGAGGTGTCTT 690151 >seq188 Length=3215107 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| | || ||| | ||| Sbjct 2830744 ATGCAGATCTTTGTGAAGACCCTAACAGGCAAGACCATCACACTTGAGGTCAAGCCCAAT 2830803 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | |||| ||||||||||| | |||||| Sbjct 2830804 GACACTATTGAGAATGTCAAAGCTAAAATCCAAAACAAGGAGGGCATCCCACCTGACCAG 2830863 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||||||||||||||||| || | ||||| ||| ||||| || Sbjct 2830864 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAT 2830923 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| |||| ||||| Sbjct 2830924 ATCCAGAAAGAGTCCACTCTGCA 2830946 >seq19201 Length=536 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || ||||| || ||||| || || || ||| | || || ||| | Sbjct 508 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCG 449 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | |||| || || | ||||| || || ||||| |||| Sbjct 448 TCCGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCACCGGAT 389 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || || | |||||| || |||||||| |||| | || ||| || ||| Sbjct 388 CAGCAGCGGCTGATATTCGCGGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGATTAC 329 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||||| | ||||| || Sbjct 328 AACATCCAGAAGGAGTCGACGCTTCA 303 >seq152 Length=4697258 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 |||| || || || || || || |||||| |||||| | |||| | ||| ||| | Sbjct 3920108 TGCAGATCTTTGTGAAGACCCTTGTGGGCAAGACCATCCCACTCGAGGCCGAGCCCAGTG 3920049 Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 ||| | | ||||| ||| | ||||| | ||||| ||||||||||| | ||||||| Sbjct 3920048 ACACTGAG--AACGC-CAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAGC 3919992 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | | || || | |||||||| |||||||| || | |||| ||| ||||| |||| Sbjct 3919991 AGCATCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCTGCACTCTCTCCGACTCTAACA 3919932 Query 40871 TCCAGAAGGAGGCCAC 40886 ||||||||||| |||| Sbjct 3919931 TCCAGAAGGAGTCCAC 3919916 >seq40511 Length=266 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AAC 40763 || || ||||| || || || ||||| |||| || ||| | | |||| | | ||| Sbjct 1 AAGACTCTCACCGGAAAGACGATCACACTCGAGGTGGAAAGCTCTGACACGATAGACAAC 60 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 | |||||| ||||| | ||||| ||||| ||||| |||||||||| | || || | Sbjct 61 G-TCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCGGACCAGCAGAGGCTGATTTT 119 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 ||| || || || || || |||| || || ||| ||||||||||||||||||||| | Sbjct 120 CGCCGGAAAGCAACTCGAGGACGGCCGAACTCTCGCTGACTACAACATCCAGAAGGAGTC 179 Query 40884 CACGCTGCATCTAGT 40898 || || ||||| || Sbjct 180 GACCCTTCATCTCGT 194 >seq25626 Length=405 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || || || || | || || || | | Sbjct 130 ATGCAGATCTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAGGTTGAGAGCTCA 189 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| ||||| ||||| || || ||||||| Sbjct 190 GACACCATTGATAACG-TCAAGGCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 248 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||||| || |||| |||||| | ||||||||| Sbjct 249 GCAGAGATTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTACAA 308 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || | ||||| || Sbjct 309 CATTCAGAAGGAGTCGACTTTACATCTTGT 338 >seq94 Length=5588587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| |||| ||||| ||| Sbjct 3280253 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTCGAGCCCAGT 3280312 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || | |||| | ||| | | |||| ||||||||||| | ||||| Sbjct 3280313 GACACTACTGAGAATG-TCAAAGCTAAAGTCCAACACAAGGAGGGCATCCCACCTGACCA 3280371 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||||||| |||| || | |||| ||| ||||| || Sbjct 3280372 GCATCGTCTGATTTTTGCCGGCAAACAGATGGAGGATGGCTGCACTCTCTCAGACTAAAA 3280431 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||| ||| |||| ||||| Sbjct 3280432 TGTCCAGAAAGAGTCCACTCTGCA 3280455 >seq123 Length=7988377 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/207 (71%), Gaps = 14/207 (7%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | || ||| ||||| Sbjct 4705976 ATGCAGATCTT-GTGAAGACCCTGACGGGCAAGACCATCACACTAGAGGTC-AAGCCCGT 4706033 Query 40750 GACAG-CGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| |||| || |||| | ||||| | | ||| ||||||||||| ||||||| Sbjct 4706034 GACACTCGTGAGAAG--TCAAAGCTAAAATCCAAGGCAAGGAGGGCATCCCACCGGACCA 4706091 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGA-------CGAGCGCACCCTCAACG 40861 || || || || | ||||||||||||||||| || || ||||| ||| || Sbjct 4706092 GCGGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGAGGATGGCCGGCCGCACTCTC--CG 4706149 Query 40862 ACTACAACATCCAGAAGGAGGCCACGC 40888 || ||||||||||| ||| || ||| Sbjct 4706150 TCTGTAACATCCAGAACGAGTCCCCGC 4706176 >seq31 Length=7567003 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||| || ||| |||||||| |||| ||| | ||| Sbjct 4143163 ATGCAGATCTT-GTGAAGACCCTCATGGACAAGACCATCACACTCGAGGTCAAGCCCAGT 4143221 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || | ||| | ||||| | ||||| |||||||||| | ||||| Sbjct 4143222 GACACTACTGAGAATG-TCAGAGCTAAAATCCAAGACAAGAAGGGCATCCCGCCTGACCA 4143280 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | || |||||||||||||| || | | ||| ||| ||||| || Sbjct 4143281 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCACACTCTCTCAGACTATAA 4143340 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| |||| ||||| Sbjct 4143341 TATCCAGAAAGAGTCCACTCTGCA 4143364 >seq48301 Length=236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | || || || |||||||| | || || || | |||| | | Sbjct 1 TTCGTTAAGACATTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTCCGATACTATT 60 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||| | || || | ||||| || || || ||| ||||||||||||| || Sbjct 61 GACAACG-TCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAGCAACGTCT 119 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 ||||| ||| || || ||||| || || | ||||| | ||||||||||||||||| Sbjct 120 CATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTGGCTGACTACAACATCCAGAA 179 Query 40878 GGAGGCCACGCTGCA 40892 |||| | || || || Sbjct 180 GGAGTCGACCCTTCA 194 >seq58060 Length=210 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 40723 ACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCT 40781 || |||||| | || || || | |||||| | | | |||| | |||| || || | Sbjct 1 ACTATCACCTTGGAAGTGGAGAGCTCCGACACCATTGATAACGTT-AAGGCTAAGATCCA 59 Query 40782 CGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGA 40841 ||||| || |||||||| |||||||||| || ||||||| ||| || || ||||| || Sbjct 60 GGACAAGGAAGGCATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGA 119 Query 40842 CGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||| | ||||||||||| ||||| ||| | || || || Sbjct 120 GGACGGTCGCACTTTGGCTGACTACAACATTCAGAAAGAGTCGACCCTTCA 170 >seq322 Length=1509210 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || || || || || || | |||||| |||||||| |||| ||||| ||| || Sbjct 334658 GCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATCAC--TCGAGGTCGAGCCCAGTGA 334601 Query 40752 CAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | || || | |||| | ||||| | ||||| ||||||||||| ||||||| Sbjct 334600 CACCACTGAGAATG-TCAATGCTAAAATCCAAGACAAGGAGGGCATCCCACTTGACCAGC 334542 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | | || ||| | |||||||||||||| || | | ||| ||| |||| || | Sbjct 334541 A--GTCTGCTCTTTGAAGGCAAACAGCTGGAGGATGGCCACACTCTCTTAGACTGTAATA 334484 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 |||||| ||| |||| ||||| Sbjct 334483 TCCAGA--GAGTCCACTCTGCA 334464 >seq139 Length=2073065 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || | ||| || | |||||||| |||||| | || | ||| ||| Sbjct 453256 ATGCAGAGCTTTGGAAAGACCCCGACGGGCAAGACCATCGCATTCAAGGTCCGGCCCAGG 453197 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || | |||| | ||||| | ||||| ||||||||||| | ||||| Sbjct 453196 GACACTACTGAGAATG-TCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 453138 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | |||||| || ||||||| || | |||| ||| | | | || Sbjct 453137 GCGGCGTCTGATTTTTGCGGGCTAATAGCTGGAGGATGGCAGCACTCTCTCAGGCGATAA 453078 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||| | | |||| |||||| | ||| | || || ||||| ||||| Sbjct 453077 TATCCAGAAAGCGTCCACTCTGCATTTGGTGCTTCGTCTGTGGGGCAGCGGC 453026 >seq56 Length=7808877 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || | || || || | |||||| ||||||||| | || ||||| || Sbjct 4819307 ATGCAGATCTTTGGGAAGACCCTGAGGGGCAAGACCATCACCCTGGAGGTCGAGCTCAGT 4819366 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | || | | |||| | ||| | || || ||||||||||| ||||||| Sbjct 4819367 GACACCATGGAGAATGTCAAAGCTCTAATCCAAGATAAGGAGGGCATCCCACGGGACCAG 4819426 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || | | || ||||| |||||||| || | ||||| | | |||| ||| Sbjct 4819427 CAGCATCTGGTTTTTGCAGGCAACCAGCTGGAGGATGGCCGCACTCACTTAGACTCTAAC 4819486 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 | |||||| | | |||| ||||| | ||| ||| || ||||| || Sbjct 4819487 AGCCAGAAAGGGTCCACCCTGCACTTGGTGCCTCGCCTGTGGGGCAGC 4819534 >seq51 Length=16196278 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||| || |||||||| | || ||||| ||| Sbjct 11819457 ATGCAGATCTTTGTGAAGACCCTGACGGTGAAGACCATCACACTTGAGGTCGAGCCCAGT 11819398 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || | | |||| | ||||| | ||||| | ||||||||| | ||||| Sbjct 11819397 GACACTACTGAGGATG-TCAAAGCTAAAATCCAAGACAAGGCGGGCATCCCACCTGACCA 11819339 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | || |||||||||||||| || | |||| ||| ||||| | Sbjct 11819338 GCAGTGTCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTATGA 11819279 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||| ||| |||| ||||| Sbjct 11819278 TATCCAGAGAGAGTCCACTCTGCA 11819255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514810637614640