Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq65 100 5e-16
>seq65
Length=9174866
Score = 100 bits (110), Expect = 5e-16
Identities = 101/128 (79%), Gaps = 4/128 (3%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | |||||||| |||||||| ||||||||| | || || ||
Sbjct 3589827 GCATTTTTTGGAGCCCAGATGAATTCTTTCATCCATGTGATTATGTACTCATACTACGGG 3589886
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
|| | || | |||||| ||| ||||| |||||||| ||||||||||| || | || |
Sbjct 3589887 TTGACTGCGTTTGGTCC-ATGGATTCAG-AAGTATCTTTGGTGGAAACGATACTTGACCA 3589944
Query 52175 TAATGCAG 52182
| |||||
Sbjct 3589945 TGTTGCAG 3589952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922464716477560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |