Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq671 84.2 3e-11 >seq671 Length=818080 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||| | | |||||| || |||| ||| | ||| || || ||| || || || || || || Sbjct 168642 CCATCACGAAGTCTCAACACCAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGA 168584 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | || || |||||||| |||| |||||||||| | ||||| Sbjct 168583 CAAAGTACATCAATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGAGCAGGAGG 168524 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 168523 AATTCCTTCCTTATCCTG 168506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742936792858880