Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq683 91.5 1e-13
seq29432 86.0 5e-12
>seq683
Length=758919
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| |||||| | || ||||| || || || |||| ||| | | ||
Sbjct 117351 ATGCAGATCTTTGTGAAAACCCTGACGGGCAAGACCATCACACTCGAGGTCAAGCCCAGT 117292
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | | |||| ||| || | ||||| | || || ||| | || |||||||
Sbjct 117291 GACACTATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 117232
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| | | | || | |||||||||||| ||||| ||| | ||| | || || | |
Sbjct 117231 CAGCATCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAC 117172
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| ||||||||| |||| || || || ||| | | |||| || |||
Sbjct 117171 ATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTTGTCTGCGGGGTGGT 117124
>seq29432
Length=351
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || |||||| |||||||||| || || ||| |||| ||||| ||
Sbjct 338 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 279
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| |||| || || | |||||||| | || || |||
Sbjct 278 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAG 219
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| || || || | || || ||||| || ||||| ||| || || |||| |
Sbjct 218 CAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGACGGGCGTACTTTGGCTGACTACAAC 159
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043
|| |||||||| ||||||||||| | |||||
Sbjct 158 ATCCAGAAAGAATCCACGCTTCATCTTGTGTT 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417980582902880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |