Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq170 150 2e-31
seq7730 82.4 7e-11
>seq170
Length=9568404
Score = 150 bits (166), Expect = 2e-31
Identities = 131/163 (80%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
||||||| |||| ||| ||||||| || || || |||| ||||||||||||||| || |
Sbjct 9399136 TCAGGCCAGTGATGTGCGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGG 9399077
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| ||||| ||||||||||| || |||||||| |||||||||||||||||||| ||
Sbjct 9399076 GCACCCCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGGCAGGACAGCTCACCGTTCA 9399017
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151
||||||| ||||| || | | || || ||||| ||||||||
Sbjct 9399016 CCACGTAGAACTGGCAAAGGGCATGGCACGGAGGTAGAGCCAT 9398974
>seq7730
Length=1237
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 20999 GACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAG 21058
||| ||||||| | | || || |||| ||| ||| ||||||||||| || || ||
Sbjct 831 GACATGAGCGAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACACCAAG 772
Query 21059 GCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAA 21118
||||| ||||| || | ||| |||| || || || ||||| || | || |||||
Sbjct 771 ACCCATATCGGCTGAGCGCTGATACATTTGACACGAAAGCTCTCCATTTGTAACATAAAA 712
Query 21119 CTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACG 21177
||| | |||| | ||| || ||||| || |||||| | ||||| | || ||||| |
Sbjct 711 CTG-CGCAAACATGTGGCATGGAGGAAGTGCCATCAACTTAAGGTCAGAAGGATTCCAAG 653
Query 21178 CGCACATAACGATGCGCCGATC 21199
| |||| | || || |||||
Sbjct 652 CCGACATTATTATCCGTCGATC 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427445259504720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |