Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq29432 150 4e-31
seq69 149 1e-30
seq189 147 5e-30
seq73 145 2e-29
seq419 140 7e-28
seq19201 134 3e-26
seq142 132 1e-25
seq19370 131 4e-25
seq42717 129 1e-24
seq514 129 1e-24
seq25626 127 5e-24
seq17446 127 5e-24
seq652 127 5e-24
seq59367 125 2e-23
seq188 122 2e-22
seq17663 100 7e-16
seq77 98.7 2e-15
seq3 93.3 1e-13
seq31 91.5 3e-13
seq58060 89.7 1e-12
seq37 89.7 1e-12
>seq29432
Length=351
Score = 150 bits (166), Expect = 4e-31
Identities = 177/238 (74%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| ||||| | || ||||| | || ||||||||||| || || ||||||
Sbjct 109 ATACCTCCTCTGAGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCA 168
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| | |||||||| || ||||||||||| || || | | ||| ||||| |||
Sbjct 169 GCCAAAGTACGCCCGTCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGA 228
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||||||||| || || ||||| || || ||||| || | ||| || | ||
Sbjct 229 GGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCG 288
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT-TTTGTGT 104566
||||| || || || ||||| || || || ||||| || || |||||||| |||| ||
Sbjct 289 ACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTTGGGT 346
>seq69
Length=3989787
Score = 149 bits (164), Expect = 1e-30
Identities = 162/214 (76%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || |||| | ||| |||| | ||| | || ||||
Sbjct 665496 ACAAGATGAAGGGTGGACTCCTTTGGAATGCTGTAGCCAGACACAGTGCGTCCAGCTTCC 665437
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCT-GTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
||||| || |||||||| || || || | | |||||||||| |||||||||||||||||
Sbjct 665436 AGTTGCTTGCCAGCAAAGATCAGTCTTTTGCTGATCAGGAGAAATTCCTTCTTTATCCTG 665377
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
|||| || ||||||||||||| ||||| ||||| ||||| || || || |||||
Sbjct 665376 GATCTGGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGGGTGATGGTCTT 665317
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||||||| ||||| || || |||||||| |||
Sbjct 665316 CCCAGTAAGAGTTTTCACGAAAATCTGCATCTTG 665283
>seq189
Length=4153236
Score = 147 bits (162), Expect = 5e-30
Identities = 161/213 (76%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || | ||| || |||||||| | || | || |||||
Sbjct 1285424 ACAAGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGACAAGGTACATCCATCTTCC 1285365
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || |||||||| | || || || ||||||||||| |||||||| ||||||||
Sbjct 1285364 AGTTGCTTGCCAGCAAAG-TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 1285306
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| ||||||||||||||| ||||| ||||| ||||| || | || |||||
Sbjct 1285305 ATCTTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACCTCAAGAGGGATGGTCTTC 1285246
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||||||| |||| | || |||||||| |||
Sbjct 1285245 CCAGTAAGGGTTTCCATGAAAATCTGCATCTTG 1285213
>seq73
Length=6645612
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || |||| || ||| ||| | ||| | || ||||
Sbjct 5748469 ACAAGATGAAGAGTGGACTCCTTTGGAATGTTGCAGTTAGACAAAGTGCGTCCAGCTTCC 5748410
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || |||| ||| |||| || || ||| ||||||| |||||||||||||||||
Sbjct 5748409 AGTTGCTTGCCAGAAAAGCTTAGTCTTTGCTGAACAGGAGGAATTCCTTCTTTATCCTGG 5748350
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| || |||||||| || || ||||| ||||| ||||| || |||||||| ||
Sbjct 5748349 ATCTTGGCCTTTACATTGTCCACTGTATCCAAGGGTTCAACCTCGAGAGTAATAGTTTTC 5748290
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||||||| ||| | | || |||||||| |||
Sbjct 5748289 CCAGTAAGAGTTCTCATGAAAATCTGCATCTTG 5748257
>seq419
Length=824084
Score = 140 bits (154), Expect = 7e-28
Identities = 153/202 (76%), Gaps = 1/202 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTT-CTAGTTGTTTTCC 104421
|| || || || ||||| || |||||||| | ||| || |||| | ||||| || ||
Sbjct 83724 GTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGTGTCCATCTTTCCAGTTGCTTGCC 83665
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
|||||| || || || | |||||||||| ||| |||| |||||||| ||||| || ||
Sbjct 83664 AGCAAAGATCAGTCTGTACAGATCAGGAGGAATTTCTTCCTTATCCTGGATCTTGGCCTT 83605
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct 83604 TACATTTTCTGTTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCAGTAAGGGT 83545
Query 104542 TTTTACAAATATCTGCATTTTG 104563
||| || || | |||||| |||
Sbjct 83544 TTTCACGAAAACCTGCATCTTG 83523
>seq19201
Length=536
Score = 134 bits (148), Expect = 3e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391
||| ||||| || | || || | || | || || || ||||| || || || || |
Sbjct 278 TCCTCCTCTCAGACGGAGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGC 337
Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451
|| || || |||||||| || || || || || || || |||| ||| ||||| || ||
Sbjct 338 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCCGCGAATATCAGCCGCTGCTGATCCGGTGG 397
Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511
|||||||| || ||||| ||||| || || ||||| || | || ||| | ||| ||
Sbjct 398 GATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCGGACGATTCAAC 457
Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||||| || || ||||| || || || ||||| ||||| ||||||||||||
Sbjct 458 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTG 509
>seq142
Length=3748655
Score = 132 bits (146), Expect = 1e-25
Identities = 157/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || ||||| || |||||||| | ||| | | |||||
Sbjct 2343167 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCTATCTTC- 2343109
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||| || |||||||| | || || |||| ||||||||| |||||||||||||||||
Sbjct 2343108 -GTTTCTTGCCAGCAAAGCTCAGTCTTTGTTAATCAGGAGGAATTCCTTCTTTATCCTGG 2343050
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
|||| | ||||||||||||| ||||| ||||| ||||| || || || | ||
Sbjct 2343049 GTCTTGGTCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGTGATGGATTTC 2342990
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
| |||||| ||||| || || ||||| || ||
Sbjct 2342989 CAAGTAAGGGTTTTCACGAAAATCTGTATCTT 2342958
>seq19370
Length=533
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || || || | |||||||||||| |||||||| |||||
Sbjct 215 ATACCTCCCCTAAGCCTCAGCACAAGGTGCAGTGTAGATTCTTTTTGAATATTGTAGTCG 156
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | || || || || |||||||| || || || | |||||| ||||| |||
Sbjct 155 GCCAAGGTACGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGA 96
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || || || ||||| || | ||| ||||| ||
Sbjct 95 GGGATGCCTTCCTTGTCTTGAATTTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCG 36
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544
||||| || || || ||||| || || || |||||
Sbjct 35 ACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTT 1
>seq42717
Length=256
Score = 129 bits (142), Expect = 1e-24
Identities = 124/159 (78%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || |||||||| || || || || ||||| || ||||||| | ||| |
Sbjct 170 AGCCTGAGAACAAGATGTAAAGTCGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTCCGG 111
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| ||||| ||||||||||| || || || |||||||| ||||| ||||| || |||||
Sbjct 110 CCATCTTCAAGTTGTTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGGATGCCTTCC 51
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500
|| ||||| ||||| ||||| ||||| || | ||| |||
Sbjct 50 TTGTCCTGGATCTTGGCTTTAACATTGTCGATGGTGTCG 12
>seq514
Length=1022489
Score = 129 bits (142), Expect = 1e-24
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
|| |||||| | || || ||||| ||||||||||| || ||||| ||||| ||||||||
Sbjct 284596 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCT 284537
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245
||||| || ||||| ||||||||||| |||||||| ||| | ||||| || || ||| |
Sbjct 284536 GCTATATTCTGGTTAAAGAAAAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTC 284477
Query 269246 ATAAGCAGGGACGAAG 269261
|| ||||| || ||||
Sbjct 284476 ATCAGCAGAGATGAAG 284461
>seq25626
Length=405
Score = 127 bits (140), Expect = 5e-24
Identities = 161/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || |||||||| || || || |||||||| || ||||| | || || |
Sbjct 347 AGCCTGAGAACAAGATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTGCGG 288
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|||||||| || || || || || || || | ||||| || || ||||| || || ||
Sbjct 287 CCGTCTTCAAGCTGCTTCCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCC 228
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||||||||| || || || || || | ||| || || | || ||||| | ||
Sbjct 227 TTGTCCTGAATCTTAGCCTTGACGTTATCAATGGTGTCTG-AGCTCTCAACCTCCAAAGT 169
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||||||| || || || || || ||||| ||||||||
Sbjct 168 AATAGTCTTTCCGGTGAGAGTCTTCACAAAGATCTGCAT 130
>seq17446
Length=585
Score = 127 bits (140), Expect = 5e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| ||||| ||||| | || || || | ||||| ||||||||||| || || || |
Sbjct 150 TTCCACCTCTGAGCCTCAAGACGAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCCG 91
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
||| |||| || ||||| ||||| ||||| ||||| || |||||||||||||| || |
Sbjct 90 CTAGGGTTCGGCCATCTTCCAGTTGCTTTCCGGCAAATATCAGCCTCTGTTGATCTGGTG 31
Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTT 104480
|||| |||||||| ||||| || || ||||
Sbjct 30 GTATACCTTCTTTGTCCTGGATTTTGGCTT 1
>seq652
Length=450682
Score = 127 bits (140), Expect = 5e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 104406 CTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTAT 104465
|||| || || || |||||||| | || || || ||| ||||||| ||||||||||| |
Sbjct 80912 CTTCCAGCTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGGAATTCCTTCTTTCT 80853
Query 104466 CCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
|||| ||||| || ||||||||||||| ||| | ||||| ||||| || || || |
Sbjct 80852 CCTGGATCTTGGCCTTTACATTTTCTATTGTAGCCAAGGGTTCAACCTCCAGAGTGATGG 80793
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||| |||||||| ||||| || || |||||||| |||
Sbjct 80792 TCTGCCCAGTAAGGGTTTTCACGAAAATCTGCATCTTG 80755
>seq59367
Length=207
Score = 125 bits (138), Expect = 2e-23
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || |||||||| || || || || || || || ||||| | | ||||||
Sbjct 149 AGCCTGAGAACGAGATGTAAAGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAAGTTCTG 90
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|||||||| ||||||||||| || || || |||||||| ||||| || || || |||||
Sbjct 89 CCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATACCTTCC 30
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTC 104490
|||||||| ||||| ||||| || || ||
Sbjct 29 TTATCCTGGATCTTGGCTTTAACGTTGTC 1
>seq188
Length=3215107
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| ||||||||||| || ||||| | || || || || ||||| ||
Sbjct 2830940 GTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCC 2830881
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | ||| || ||||| || || || || || | || || || |||||
Sbjct 2830880 GCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTTTTGGATTTTAGCTTTG 2830821
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || | || | ||||| ||||| || ||||| || || || ||
Sbjct 2830820 ACATTCTCAATAGTGTCATTGGGCTTGACCTCAAGTGTGATGGTCTTGCCTGTTAGGGTC 2830761
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 2830760 TTCACAAAGATCTGCAT 2830744
>seq17663
Length=579
Score = 100 bits (110), Expect = 7e-16
Identities = 116/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 269132 AGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG-GTCTTTTGCCGCTAT 269190
||| | ||||||||||| || ||||| || ||||| ||||| |||||| || ||
Sbjct 368 AGGCTGGTTGCTTTTGCATGCGTCGAAGGAATCTTCTTCTCGGGAAGCTTTTG-TGCCAT 310
Query 269191 CTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAG 269250
||| ||| | ||||| ||||| |||||||| || || |||||||| ||||| | |||
Sbjct 309 CTTCTGGCTTAAGAAGAGAGGTCTTATGCCGGGTTTGACTTTCTCAAACGAGCTTATATC 250
Query 269251 CAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284
||| || || || | ||||| ||||| ||||||
Sbjct 249 CAGAGATGAGGGGCTTCACTGTGACTTTGCTTGT 216
>seq77
Length=5608019
Score = 98.7 bits (108), Expect = 2e-15
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 104376 GAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCC 104435
|||| || |||||||| | ||| | || |||| ||||| || |||||||| || ||
Sbjct 2407090 GAATGTTGTAGTCAGACAAAGTGCGTCCAGCTTCCAGTTGCTTGCCAGCAAAGATCAGTT 2407149
Query 104436 TCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTA 104492
| || ||||||||||| |||||||| |||||||| ||| | || |||||||||| ||
Sbjct 2407150 TTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCATGGCCTTTACATTTTTTA 2407206
>seq3
Length=9954913
Score = 93.3 bits (102), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
|||||| | | || ||||||||||| |||||||| || |||||||| || ||||||||
Sbjct 27095 GGAGAACGTGTTGTAGCTTTTGCCGCAGTAGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 27154
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245
| || || ||| | |||||| |||| || ||||| || | || || || || ||| |
Sbjct 27155 TCAATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 27214
Query 269246 ATAAGCAGGGACGA 269259
|| ||||| || ||
Sbjct 27215 ATTAGCAGAGATGA 27228
>seq31
Length=7567003
Score = 91.5 bits (100), Expect = 3e-13
Identities = 139/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| ||||||||||| || ||||| || || || || ||||| ||
Sbjct 4143358 GTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGGCCATCCTCCAGCTGTTTGCCT 4143299
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || ||| || ||||| || || || | || || || || || ||| |
Sbjct 4143298 GCAAAAATCAGATGCTGCTGGTCAGGCGGGATGCCCTTCTTGTCTTGGATTTTAGCTCTG 4143239
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || || || || || | ||||| ||||| || ||||| | | || ||
Sbjct 4143238 ACATTCTCAGTAGTGTCACTGGGCTTGACCTCGAGTGTGATGGTCTTGTCCATGAGGGTC 4143179
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 4143178 TTCAC-AAGATCTGCAT 4143163
>seq58060
Length=210
Score = 89.7 bits (98), Expect = 1e-12
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || | || | || || ||||||||||| || ||||||| | ||| | |
Sbjct 185 AGCCTGAGAACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGTGCGA 126
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || || ||||| || || || | ||| || || || || || |||||
Sbjct 125 CCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCC 66
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500
|| ||||| ||||| || || || || || | ||| |||
Sbjct 65 TTGTCCTGGATCTTAGCCTTAACGTTATCAATGGTGTCG 27
>seq37
Length=4917346
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/195 (71%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| |||||| ||| || |||| || || || || || ||||| |||
Sbjct 4245708 GTGGACTCTTTCTGGATATTAGCGTCTGA--GAGTGCTGCCATCCTCCAGCTGTTTGCCA 4245651
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || ||| || ||||| || || || || | | || || | |||||
Sbjct 4245650 GCAAAAATCAGATGCTGCTGCTCAGGCGGGATGCCCTCCTGGACTTGGATTTGAGCTTTG 4245591
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || || || || || || ||||| ||||| || |||| || || || ||
Sbjct 4245590 ACATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTGGCCGGTCAGGGTC 4245531
Query 104543 TTTACAAATATCTGC 104557
|| || || ||||||
Sbjct 4245530 TTCAC-AAGATCTGC 4245517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150462529347812
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