Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq170 109 4e-19 >seq170 Length=9568404 Score = 109 bits (120), Expect = 4e-19 Identities = 115/150 (77%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||||| ||||| ||||| | |||||| Sbjct 9399119 GCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACCCCCAGGCCCATG 9399060 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | | |||||||| || ||||| || || ||||| ||| |||||| ||||| || Sbjct 9399059 T-CTGCTGACCTCTGATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 9399001 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | || | ||||||||| ||||| || || Sbjct 9399000 AAGGGCATGGCACGGAGGTAGAGCCATGAG 9398971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339874618256547