Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq29432 140 8e-28
seq19201 138 3e-27
seq40511 132 1e-25
seq21504 132 1e-25
seq10281 131 4e-25
seq273 122 2e-22
seq188 114 3e-20
seq475 113 1e-19
seq59367 111 4e-19
seq48301 109 1e-18
seq69 109 1e-18
seq58 105 2e-17
seq419 100 7e-16
seq189 95.1 3e-14
seq31 95.1 3e-14
seq636 93.3 1e-13
seq9721 91.5 3e-13
seq652 89.7 1e-12
seq17446 84.2 5e-11
seq37 84.2 5e-11
seq17 84.2 5e-11
>seq29432
Length=351
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || | ||| || | || ||||||| |||| |||||| ||||| || ||||| ||
Sbjct 112 CCTCCTCTGAGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCAGCC 171
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || |||||||| | |||||||| |||||||||| ||||| ||| |||
Sbjct 172 AAAGTACGCCCGTCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGAGGG 231
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||||||||| || ||||| || || || || || || || | || || || ||
Sbjct 232 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 291
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 292 TCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 338
>seq19201
Length=536
Score = 138 bits (152), Expect = 3e-27
Identities = 153/203 (75%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || ||||| || | ||||||||| | || || || |||||
Sbjct 315 TCCTTCTGGATGTTGTAATCCGCGAGTGTCCTTCCGTCTTCCAGCTGCTTCCCCGCGAAT 374
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| ||| |||||||||||| || |||||||| ||||| ||||| ||
Sbjct 375 ATCAGCCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTG 434
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| |||||| || || || || ||||||||||| || || || || ||
Sbjct 435 TCGATCGTGTCGGACGATTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACA 494
Query 288463 AATATCTGCATTATG-TTATTCT 288484
|| ||||||||| || || ||||
Sbjct 495 AAGATCTGCATTTTGCTTCTTCT 517
>seq40511
Length=266
Score = 132 bits (146), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| || || |||||||||| || || || ||||| || ||||| |||
Sbjct 212 CCTCCACGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCG 153
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | ||| ||||| ||||| ||||| | ||| || ||||
Sbjct 152 AGAGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCCGGTGGG 93
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
||||| || || || |||||||| || || ||||| ||||| | || ||| |||
Sbjct 92 ATTCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTGTCTATCGTGTCAGAGCT---TTCC 36
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| ||||| ||||||||||| ||||| ||||||||
Sbjct 35 ACCTCGAGTGTGATCGTCTTTCCGGTGAGAGTCTT 1
>seq21504
Length=484
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | |||| || ||| || ||||| || ||||||||
Sbjct 469 CCACCACGGAGACGAAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCC 410
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || | || || || |||||||| |||||||| || ||||
Sbjct 409 AAAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 350
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||| ||||| ||||||||||| || || | || |||| ||
Sbjct 349 ATGCCCTCCTTGTCCTGAATTTTGGCTTTCACGTTATCAATGGTGTCAGAGCTC---TCC 293
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| ||||| ||||| || || || ||||||||||| || |||||
Sbjct 292 ACTTCGAGGGTGATAGTCTTGCCTGTAAGGGTCTTGACGAAGATTTGCAT 243
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| || || || ||||| ||||| | ||| ||||| ||||||
Sbjct 205 TCTTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCATCTTCGAGTTGCTTTCCGGCGAAG 146
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| | | || || |||||| ||||| || ||||| || || | |||||||||
Sbjct 145 ATTAACCTTTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGTATCTTGGTTTTCACGTTG 86
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| |||| ||| ||| || || ||||| ||||||||||| ||||| || ||||||
Sbjct 85 TCGATAGTGTCGGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCGGTGAGTGTCTTG 29
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 28 ACGAAGATCTGCAT 15
>seq10281
Length=966
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| || | ||||| || || || | || ||||| ||||||
Sbjct 909 TCTTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAG 850
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| |||||||| || |||||||| || || |||||
Sbjct 849 ATGAGACGCTGCTGGTCCGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTG 790
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| |||| ||| ||| || || || || ||||| |||||||| || || ||||||
Sbjct 789 TCGATAGTATCAGAACTC---TCGACCTCCAGAGTGATGGTCTTCCCCGTAAGGGTCTTG 733
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 732 ACGAAGATCTGCAT 719
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| || || || | || | |||| ||||| ||||| || ||||||||
Sbjct 261 CCACCACGGAGCCTGAGGACCAAGTGGAGCGTGGACTCTTTCTGGATGTTGTAGTCGGCC 202
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || |||||||| | ||||| || |||||||| || | ||| || |||
Sbjct 201 AAAGTTCGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGG 142
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| ||||||||||| || |||| ||||| || || | || ||| |||
Sbjct 141 ATGCCTTCCTTATCCTGGATCTTGACTTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 85
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||| |||||||| | ||| |||||||
Sbjct 84 ACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAATGAAGGTCTGCAT 35
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | | || | |||| ||| || || ||||| || ||||
Sbjct 721 CATG-CCACCACGGAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGT 663
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || | || || |||||||| | || |||||||| ||||||| | ||| |||
Sbjct 662 CAGCCAAAGTCCGGCCGTCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCCG 603
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
|||||| |||||||| || |||||||| ||||||||||| || || | ||| ||||
Sbjct 602 GTGGGATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCGATGGTATCAGAGCTC- 544
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || | || ||||||||||| |||| || || || || || |||||
Sbjct 543 --TCCACCTCCAAAGTAATCGTCTTCCCCGTCAAGGTTTTAACAAAGATTTGCAT 491
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || || || || |||||||||| || || || ||||| || ||||| ||
Sbjct 489 CCCCCACGAAGCCTGAGCACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 430
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || ||||| || ||||||| | || || |||
Sbjct 429 AGAGTCCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGT 370
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| || || ||||| || ||||| || || ||||| || | | ||| ||| ||
Sbjct 369 ATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTGTCGACGGTGTCGGAGCTC---TCG 313
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| |||||||||||||| || || || |||||||| ||||||||
Sbjct 312 ACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 263
>seq273
Length=4066651
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||||| || |||||||||||||| || ||||| || || |||
Sbjct 887225 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAACTGTTTGCCGGCAAAG 887284
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || | ||||| || ||||| || ||||| || || || || ||
Sbjct 887285 ATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTC 887344
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| ||||||| ||||| ||
Sbjct 887345 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACA 887404
Query 288463 AATATCTGCATT 288474
|| |||||||||
Sbjct 887405 AAGATCTGCATT 887416
>seq188
Length=3215107
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||||||||| | ||| ||||| || || || | ||||| || || ||
Sbjct 2830934 TCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAA 2830875
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | |||||| || || || | |||||||| ||||| || ||
Sbjct 2830874 ATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTTTTGGATTTTAGCTTTGACATTC 2830815
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| || | | | || || || ||||| ||||| || || || ||||| ||
Sbjct 2830814 TCAATAGTGTCATTGGGCTTGACCTCAAGTGTGATGGTCTTGCCTGTTAGGGTCTTCACA 2830755
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2830754 AAGATCTGCAT 2830744
>seq475
Length=1570329
Score = 113 bits (124), Expect = 1e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||||| || ||||| | || || || || |||
Sbjct 1256070 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAG 1256011
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || || ||||||||||| || || ||||| ||
Sbjct 1256010 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTC 1255951
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| | || || || || ||||| ||||| || ||||| ||||| |||
Sbjct 1255950 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 1255891
Query 288463 AATATCTGCATTATG 288477
|| || |||||| ||
Sbjct 1255890 AAAATTTGCATTTTG 1255876
>seq59367
Length=207
Score = 111 bits (122), Expect = 4e-19
Identities = 123/163 (75%), Gaps = 1/163 (1%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || || || |||||||| | || || |||||||| || ||||
Sbjct 162 CATG-CCACCACGAAGCCTGAGAACGAGATGTAAAGTCGACTCCTTTTGGATGTTGTAGT 104
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| | || | |||||||| | ||||||||| |||||||| || | ||| |||
Sbjct 103 CGGCCAAAGTTCTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGATCCG 44
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404
|||||| ||||| ||||||||||| || ||||| ||||| ||
Sbjct 43 GTGGGATACCTTCCTTATCCTGGATCTTGGCTTTAACGTTGTC 1
>seq48301
Length=236
Score = 109 bits (120), Expect = 1e-18
Identities = 160/224 (71%), Gaps = 12/224 (5%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | |||| || || || ||||| || ||||| ||
Sbjct 218 CCACCACGAAGACGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 159
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || | || ||||| |||||||| ||||| || || || |||
Sbjct 158 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGG---TCCGGG 102
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420
|| ||||| || |||||||| || ||||| ||||| || |||| |||| |||
Sbjct 101 GGAATACCTTCCTTGTCCTGGATCTTAGCTTTGACGTTGTCAATAGTATCGGAGCTC--- 45
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| || || || ||||| ||||||||||||| ||||| |||||
Sbjct 44 TCCACCTCAAGAGTGATGGTCTTCCCGGTCAATGTCTTAACGAA 1
>seq69
Length=3989787
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 5/230 (2%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||| | | || ||||||| ||| || ||| | || | ||| | |
Sbjct 665514 CCACCACGCAGTGTCAACACAAGATGAAGGGTGGACTCCTTTGGAATGCTGTAGCCAGAC 665455
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| |||||||| |||| | ||| || || || |||||||| | | ||| ||| ||
Sbjct 665454 ACAGTGCGTCCAGCTTCCAGTTGCTTGCCAGCAAAGATCAGTC--TTTTGCTGATCAGGA 665397
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|||||||||||||||||||| | || || || |||||||| | ||| | |||
Sbjct 665396 GAAATTCCTTCTTTATCCTGGATCTGGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 665337
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| |||||||| || ||||| || ||||| ||||||||
Sbjct 665336 ACCTCAAGGGTGATGGTCTTCCCAGTAAGAGTTTTCACGAAAATCTGCAT 665287
>seq58
Length=4472761
Score = 105 bits (116), Expect = 2e-17
Identities = 160/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| ||| || ||| | || || ||||| |
Sbjct 4394499 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTGGAATGTTGTAGTCAGAC 4394558
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||||| |||| | ||| || || || ||| |||| | || |||| | |
Sbjct 4394559 AG--TGCGTCCAGCTTCCACTTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGCA 4394616
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || | || | |||||||| | ||| | ||| ||
Sbjct 4394617 ATTCCTTCCTTATCCTGGATCTTTGTCTTTATATTTTCTATTGTATCCAAGGGTTCAACC 4394676
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| || ||||| || || || || || || ||||||||
Sbjct 4394677 TCGAGGGTGATAGTTTTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 4394723
>seq419
Length=824084
Score = 100 bits (110), Expect = 7e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || |||| || ||| || ||||| || || ||||| |
Sbjct 83753 CCACCACG-AGTCTCAACACAAGATAAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 83695
Query 288307 AGCGTGCGTCCGTCTT-CTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA--ATCT 288363
| ||| |||| |||| | | ||| || || || |||||||| | ||| ||| |
Sbjct 83694 ACAGTGTGTCCATCTTTCCAGTTGCTTGCCAGCAAAGATCAGTC--TGTACAGATCAGGA 83637
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||| |||| ||||||||||| || || || || |||||| | | ||| | |||
Sbjct 83636 GGAATTTCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCA 83577
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| |||||||| || || || || ||||| | ||||||
Sbjct 83576 ACCTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAACCTGCAT 83527
>seq189
Length=4153236
Score = 95.1 bits (104), Expect = 3e-14
Identities = 158/227 (70%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||| | | || ||||||| ||| || |||| || || ||||| |
Sbjct 1285442 CCACCACGAAGTGTCAACACAAGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGAC 1285383
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| ||||| | ||| || || || ||| |||| | || ||| | ||
Sbjct 1285382 AAGGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG-TCAGTCTTTGCTGATCAGGAGGA 1285324
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || ||||| || |||||| | | ||| | ||| ||
Sbjct 1285323 ATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACC 1285264
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||| |||||||| || || || | | ||| ||||||||
Sbjct 1285263 TCAAGAGGGATGGTCTTCCCAGTAAGGGTTTCCATGAAAATCTGCAT 1285217
>seq31
Length=7567003
Score = 95.1 bits (104), Expect = 3e-14
Identities = 160/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTAC-GAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||| || || | ||| || ||| || | ||| ||||| |||||||||||||| |
Sbjct 4143388 CCACCCCGCAGACGAAGCACCGAG-TGCAGAGTGGACTCTTTCTGGATATTATAGTCTGA 4143330
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| ||| | || || || | ||||| ||||| || |||||| |||| || | ||
Sbjct 4143329 GAGAGTGTGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGCGG 4143270
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||| || | || || |||||||| ||| | || || || ||| || || | | ||
Sbjct 4143269 GATGCCCTTCTTGTCTTGGATTTTAGCTCTGACATTCTCAGTAGTGTCACTGGGCTTGAC 4143210
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| | | || ||||| || || ||||||||
Sbjct 4143209 CTCGAGTGTGATGGTCTTGTCCATGAGGGTCTTCAC-AAGATCTGCAT 4143163
>seq636
Length=882662
Score = 93.3 bits (102), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 10/221 (5%)
Strand=Plus/Plus
Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315
||||| | || ||||||| || |||||||| || || ||||| | || | |
Sbjct 752563 AGTCTCAACACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTC----AAAGTACAT 752618
Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGA---TTCCT 288372
|||||||| | || || || || |||||||| | ||| |||| || | |||||
Sbjct 752619 CCGTCTTCCAGTTACTTGCCAGCAAAGATCAGTCT---TTGCCAATCAGGAAGAATTCCT 752675
Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432
|| ||||||||||| | || || || || ||| | | ||| | ||| || | |||
Sbjct 752676 TCCTTATCCTGGATCCTGGCCTTTACATTATCTGTTGTATCCGAGGGTTCAACCTTGAGA 752735
Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| |||||||| || || || |||| ||| ||||||||
Sbjct 752736 GTGATGGTCTTCCCAGTAAGGGTTTTGATGAAAATCTGCAT 752776
>seq9721
Length=1014
Score = 91.5 bits (100), Expect = 3e-13
Identities = 221/329 (67%), Gaps = 12/329 (4%)
Strand=Plus/Minus
Query 52724 AAACTCGCCAAAGAACTGGGAGTTGTGATTCCGATTCCTTTCTTCGAGAAAGATGGGAAC 52783
|| || || || || ||||| || ||||| ||| || ||||| ||| ||| ||
Sbjct 746 AAGCTGGCAAAGGAGCTGGGTGTAGTGATACCGGTTAGCTTCTTTGAGGAAGCA---AAT 690
Query 52784 AATT---ATTACAATTCCGTCGCTGTCGCGGATGCCGATGGTTCTATCGTAGGTGTTTAC 52840
||| ||||||| || | || | ||||| ||||| || | | || |||||
Sbjct 689 AATGCACATTACAACTCAATAGCCATTATCGATGCTGATGGAACTGACCTTGGGGTTTAT 630
Query 52841 AGAAAAACTCATATCCCTCAGAGCAAGTGTTACGAAGAGAAATTTTACTTTACACCGAGT 52900
|| || | ||||| ||| | | ||||| ||||||| ||||| || | || |
Sbjct 629 AGGAAGTCGCATATTCCTGATGGACCTGGTTACCAAGAGAAGTTTTATTTCAATCCTGGA 570
Query 52901 AGCAATCCGTATGAAGTTTTTGAAACGAAATATGGAAAACTAGGCGT-GCTGATTTGCTG 52959
|| | | | | |||||| | || || | || |||| | ||||| ||| || || ||
Sbjct 569 GACACTGGCTTTAAGGTTTTTCAGACAAAGTTTGCAAAAATTGGCGTAGCT-ATATGTTG 511
Query 52960 GGATCAGTGGTTCTCTGAAGCAGCGAAATGTCTGGCTCTAGAAGGCGCTGA--TTTTATT 53017
|||||||||||| |||| ||||| | | |||||||| | || ||||| |||| ||
Sbjct 510 GGATCAGTGGTTTCCTGAGGCAGCTCGAGCTATGGCTCTACAGGGTGCTGAAGTTTTGTT 451
Query 53018 GTATACCCCACCGCCATCGGCTCGGAGCC 53046
||| ||||||||||| || || || ||
Sbjct 450 TTAT--CCCACCGCCATTGGTTCTGAACC 424
>seq652
Length=450682
Score = 89.7 bits (98), Expect = 1e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369
|| ||||| |||| | || || || || ||| |||| | || |||| | || |||
Sbjct 80922 GTACGTCCACCTTCCAGCTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGGAATT 80863
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||| |||||||| || || || || |||||||| | | | | ||| || ||
Sbjct 80862 CCTTCTTTCTCCTGGATCTTGGCCTTTACATTTTCTATTGTAGCCAAGGGTTCAACCTCC 80803
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| |||| ||| || || || || ||||| ||||||||
Sbjct 80802 AGAGTGATGGTCTGCCCAGTAAGGGTTTTCACGAAAATCTGCAT 80759
>seq17446
Length=585
Score = 84.2 bits (92), Expect = 5e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | ||| || | ||||| |||| || ||||| || || || || || ||
Sbjct 149 TCCACCTCTGAGCCTCAAGACGAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCCGC 90
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || || ||||| | ||| ||||| || || ||||| | ||||||| |||
Sbjct 89 TAGGGTTCGGCCATCTTCCAGTTGCTTTCCGGCAAATATCAGCCTCTGTTGATCTGGTGG 30
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTT 288394
|| |||||||| ||||||||||| ||||
Sbjct 29 TATACCTTCTTTGTCCTGGATTTTGGCTT 1
>seq37
Length=4917346
Score = 84.2 bits (92), Expect = 5e-11
Identities = 137/194 (71%), Gaps = 9/194 (5%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||||||| ||| | ||| ||| || || || | ||||| || || ||
Sbjct 765502 TCTTTCTGGATATTAGCGTCTGAGAG--TGCTGCCATCCTCCAGCTGTTTGCCCGCAAAA 765559
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | ||||| || || | || ||||||| ||||| || ||
Sbjct 765560 ATCAGACGCTGCTGCTCAGGCGGGATGCCCTCCTGGTCTTGGATTTGAGCTTTGACATTC 765619
Query 288403 TCTATAGAATC-----GCTCGA-TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| ||| || |||||| || || ||||| ||||| |||| |||||||| |||
Sbjct 765620 TCAGTAGTGTCACTGGGCTCGACCTCGACCTCGAGTGTGATGGTCTGGCCGGTCAGGGTC 765679
Query 288457 TTGACGAATATCTG 288470
|| || || |||||
Sbjct 765680 TTCAC-AAGATCTG 765692
>seq17
Length=7276961
Score = 84.2 bits (92), Expect = 5e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| | |||||||| || ||||| ||| || || || | ||||| ||| | ||
Sbjct 4934301 TCTTTCTAGATATTATCATCTGCGAGAATGCAACCATCCTCCAGCTGTTTGCCTACAAAA 4934242
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||| ||| || | |||||| || || | ||||||||||| ||||| | ||
Sbjct 4934241 ATCAGACACTGCTGGTCAGGTGGGATGCCCTCCTAGTCCTGGATTTTAGCTTTGCCATTC 4934182
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | || || || | || || | || ||||| ||||| | |||||| |||| ||
Sbjct 4934181 TCAACAGTGTCACTGGGCTCCACCTTAAGTGTGATGGTCTTAGCAGTCAGACTCTTCACA 4934122
Query 288463 AATATCTGC 288471
|| ||| ||
Sbjct 4934121 AAGATCGGC 4934113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178695562526642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |