Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq29432 140 8e-28 seq19201 138 3e-27 seq40511 132 1e-25 seq21504 132 1e-25 seq10281 131 4e-25 seq273 122 2e-22 seq188 114 3e-20 seq475 113 1e-19 seq59367 111 4e-19 seq48301 109 1e-18 seq69 109 1e-18 seq58 105 2e-17 seq419 100 7e-16 seq189 95.1 3e-14 seq31 95.1 3e-14 seq636 93.3 1e-13 seq9721 91.5 3e-13 seq652 89.7 1e-12 seq17446 84.2 5e-11 seq37 84.2 5e-11 seq17 84.2 5e-11 >seq29432 Length=351 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || | ||| || | || ||||||| |||| |||||| ||||| || ||||| || Sbjct 112 CCTCCTCTGAGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCAGCC 171 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| | |||||||| |||||||||| ||||| ||| ||| Sbjct 172 AAAGTACGCCCGTCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGAGGG 231 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || ||||| || || || || || || || | || || || || Sbjct 232 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 291 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 292 TCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 338 >seq19201 Length=536 Score = 138 bits (152), Expect = 3e-27 Identities = 153/203 (75%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || ||||| || | ||||||||| | || || || ||||| Sbjct 315 TCCTTCTGGATGTTGTAATCCGCGAGTGTCCTTCCGTCTTCCAGCTGCTTCCCCGCGAAT 374 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| ||| |||||||||||| || |||||||| ||||| ||||| || Sbjct 375 ATCAGCCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTG 434 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| |||||| || || || || ||||||||||| || || || || || Sbjct 435 TCGATCGTGTCGGACGATTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACA 494 Query 288463 AATATCTGCATTATG-TTATTCT 288484 || ||||||||| || || |||| Sbjct 495 AAGATCTGCATTTTGCTTCTTCT 517 >seq40511 Length=266 Score = 132 bits (146), Expect = 1e-25 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| || || |||||||||| || || || ||||| || ||||| ||| Sbjct 212 CCTCCACGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCG 153 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| ||||| ||||| ||||| | ||| || |||| Sbjct 152 AGAGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCCGGTGGG 93 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || || |||||||| || || ||||| ||||| | || ||| ||| Sbjct 92 ATTCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTGTCTATCGTGTCAGAGCT---TTCC 36 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || ||||| ||||||||||| ||||| |||||||| Sbjct 35 ACCTCGAGTGTGATCGTCTTTCCGGTGAGAGTCTT 1 >seq21504 Length=484 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| || ||| || ||||| || |||||||| Sbjct 469 CCACCACGGAGACGAAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCC 410 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || || || |||||||| |||||||| || |||| Sbjct 409 AAAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 350 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| ||||| ||||||||||| || || | || |||| || Sbjct 349 ATGCCCTCCTTGTCCTGAATTTTGGCTTTCACGTTATCAATGGTGTCAGAGCTC---TCC 293 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || || || ||||||||||| || ||||| Sbjct 292 ACTTCGAGGGTGATAGTCTTGCCTGTAAGGGTCTTGACGAAGATTTGCAT 243 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| || || || ||||| ||||| | ||| ||||| |||||| Sbjct 205 TCTTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCATCTTCGAGTTGCTTTCCGGCGAAG 146 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | | || || |||||| ||||| || ||||| || || | ||||||||| Sbjct 145 ATTAACCTTTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGTATCTTGGTTTTCACGTTG 86 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| ||| ||| || || ||||| ||||||||||| ||||| || |||||| Sbjct 85 TCGATAGTGTCGGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCGGTGAGTGTCTTG 29 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 28 ACGAAGATCTGCAT 15 >seq10281 Length=966 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| || | ||||| || || || | || ||||| |||||| Sbjct 909 TCTTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAG 850 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || |||||| |||||||| || |||||||| || || ||||| Sbjct 849 ATGAGACGCTGCTGGTCCGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTG 790 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| ||| ||| || || || || ||||| |||||||| || || |||||| Sbjct 789 TCGATAGTATCAGAACTC---TCGACCTCCAGAGTGATGGTCTTCCCCGTAAGGGTCTTG 733 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 732 ACGAAGATCTGCAT 719 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | || | |||| ||||| ||||| || |||||||| Sbjct 261 CCACCACGGAGCCTGAGGACCAAGTGGAGCGTGGACTCTTTCTGGATGTTGTAGTCGGCC 202 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| | ||||| || |||||||| || | ||| || ||| Sbjct 201 AAAGTTCGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGG 142 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || |||| ||||| || || | || ||| ||| Sbjct 141 ATGCCTTCCTTATCCTGGATCTTGACTTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 85 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| | ||| ||||||| Sbjct 84 ACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAATGAAGGTCTGCAT 35 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | | || | |||| ||| || || ||||| || |||| Sbjct 721 CATG-CCACCACGGAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGT 663 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | || || |||||||| | || |||||||| ||||||| | ||| ||| Sbjct 662 CAGCCAAAGTCCGGCCGTCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCCG 603 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| |||||||| || |||||||| ||||||||||| || || | ||| |||| Sbjct 602 GTGGGATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCGATGGTATCAGAGCTC- 544 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || ||||||||||| |||| || || || || || ||||| Sbjct 543 --TCCACCTCCAAAGTAATCGTCTTCCCCGTCAAGGTTTTAACAAAGATTTGCAT 491 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || || |||||||||| || || || ||||| || ||||| || Sbjct 489 CCCCCACGAAGCCTGAGCACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 430 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || ||||||| | || || ||| Sbjct 429 AGAGTCCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGT 370 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || ||||| || ||||| || || ||||| || | | ||| ||| || Sbjct 369 ATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTGTCGACGGTGTCGGAGCTC---TCG 313 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||||||||| || || || |||||||| |||||||| Sbjct 312 ACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 263 >seq273 Length=4066651 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||||| || |||||||||||||| || ||||| || || ||| Sbjct 887225 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAACTGTTTGCCGGCAAAG 887284 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || | ||||| || ||||| || ||||| || || || || || Sbjct 887285 ATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTC 887344 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| ||||||| ||||| || Sbjct 887345 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACA 887404 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 887405 AAGATCTGCATT 887416 >seq188 Length=3215107 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||||||||| | ||| ||||| || || || | ||||| || || || Sbjct 2830934 TCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAA 2830875 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | |||||| || || || | |||||||| ||||| || || Sbjct 2830874 ATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTTTTGGATTTTAGCTTTGACATTC 2830815 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || | | | || || || ||||| ||||| || || || ||||| || Sbjct 2830814 TCAATAGTGTCATTGGGCTTGACCTCAAGTGTGATGGTCTTGCCTGTTAGGGTCTTCACA 2830755 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2830754 AAGATCTGCAT 2830744 >seq475 Length=1570329 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || || || || ||| Sbjct 1256070 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAG 1256011 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || || ||||||||||| || || ||||| || Sbjct 1256010 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTC 1255951 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| ||||| || ||||| ||||| ||| Sbjct 1255950 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 1255891 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 1255890 AAAATTTGCATTTTG 1255876 >seq59367 Length=207 Score = 111 bits (122), Expect = 4e-19 Identities = 123/163 (75%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || || || |||||||| | || || |||||||| || |||| Sbjct 162 CATG-CCACCACGAAGCCTGAGAACGAGATGTAAAGTCGACTCCTTTTGGATGTTGTAGT 104 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || | |||||||| | ||||||||| |||||||| || | ||| ||| Sbjct 103 CGGCCAAAGTTCTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGATCCG 44 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404 |||||| ||||| ||||||||||| || ||||| ||||| || Sbjct 43 GTGGGATACCTTCCTTATCCTGGATCTTGGCTTTAACGTTGTC 1 >seq48301 Length=236 Score = 109 bits (120), Expect = 1e-18 Identities = 160/224 (71%), Gaps = 12/224 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | |||| || || || ||||| || ||||| || Sbjct 218 CCACCACGAAGACGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 159 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || ||||| |||||||| ||||| || || || ||| Sbjct 158 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGG---TCCGGG 102 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || ||||| || |||||||| || ||||| ||||| || |||| |||| ||| Sbjct 101 GGAATACCTTCCTTGTCCTGGATCTTAGCTTTGACGTTGTCAATAGTATCGGAGCTC--- 45 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || || || || ||||| ||||||||||||| ||||| ||||| Sbjct 44 TCCACCTCAAGAGTGATGGTCTTCCCGGTCAATGTCTTAACGAA 1 >seq69 Length=3989787 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||| | | || ||||||| ||| || ||| | || | ||| | | Sbjct 665514 CCACCACGCAGTGTCAACACAAGATGAAGGGTGGACTCCTTTGGAATGCTGTAGCCAGAC 665455 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| |||| | ||| || || || |||||||| | | ||| ||| || Sbjct 665454 ACAGTGCGTCCAGCTTCCAGTTGCTTGCCAGCAAAGATCAGTC--TTTTGCTGATCAGGA 665397 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||||||||||||||| | || || || |||||||| | ||| | ||| Sbjct 665396 GAAATTCCTTCTTTATCCTGGATCTGGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 665337 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| |||||||| || ||||| || ||||| |||||||| Sbjct 665336 ACCTCAAGGGTGATGGTCTTCCCAGTAAGAGTTTTCACGAAAATCTGCAT 665287 >seq58 Length=4472761 Score = 105 bits (116), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||| | || || ||||| | Sbjct 4394499 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTGGAATGTTGTAGTCAGAC 4394558 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||||| |||| | ||| || || || ||| |||| | || |||| | | Sbjct 4394559 AG--TGCGTCCAGCTTCCACTTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGCA 4394616 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || | || | |||||||| | ||| | ||| || Sbjct 4394617 ATTCCTTCCTTATCCTGGATCTTTGTCTTTATATTTTCTATTGTATCCAAGGGTTCAACC 4394676 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| || || || || || || |||||||| Sbjct 4394677 TCGAGGGTGATAGTTTTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 4394723 >seq419 Length=824084 Score = 100 bits (110), Expect = 7e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || |||| || ||| || ||||| || || ||||| | Sbjct 83753 CCACCACG-AGTCTCAACACAAGATAAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 83695 Query 288307 AGCGTGCGTCCGTCTT-CTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA--ATCT 288363 | ||| |||| |||| | | ||| || || || |||||||| | ||| ||| | Sbjct 83694 ACAGTGTGTCCATCTTTCCAGTTGCTTGCCAGCAAAGATCAGTC--TGTACAGATCAGGA 83637 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||| |||| ||||||||||| || || || || |||||| | | ||| | ||| Sbjct 83636 GGAATTTCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCA 83577 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| |||||||| || || || || ||||| | |||||| Sbjct 83576 ACCTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAACCTGCAT 83527 >seq189 Length=4153236 Score = 95.1 bits (104), Expect = 3e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||| | | || ||||||| ||| || |||| || || ||||| | Sbjct 1285442 CCACCACGAAGTGTCAACACAAGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGAC 1285383 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||| || || || ||| |||| | || ||| | || Sbjct 1285382 AAGGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG-TCAGTCTTTGCTGATCAGGAGGA 1285324 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || ||||| || |||||| | | ||| | ||| || Sbjct 1285323 ATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACC 1285264 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||| |||||||| || || || | | ||| |||||||| Sbjct 1285263 TCAAGAGGGATGGTCTTCCCAGTAAGGGTTTCCATGAAAATCTGCAT 1285217 >seq31 Length=7567003 Score = 95.1 bits (104), Expect = 3e-14 Identities = 160/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTAC-GAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| || || | ||| || ||| || | ||| ||||| |||||||||||||| | Sbjct 4143388 CCACCCCGCAGACGAAGCACCGAG-TGCAGAGTGGACTCTTTCTGGATATTATAGTCTGA 4143330 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||| | || || || | ||||| ||||| || |||||| |||| || | || Sbjct 4143329 GAGAGTGTGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGCGG 4143270 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || | || || |||||||| ||| | || || || ||| || || | | || Sbjct 4143269 GATGCCCTTCTTGTCTTGGATTTTAGCTCTGACATTCTCAGTAGTGTCACTGGGCTTGAC 4143210 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| | | || ||||| || || |||||||| Sbjct 4143209 CTCGAGTGTGATGGTCTTGTCCATGAGGGTCTTCAC-AAGATCTGCAT 4143163 >seq636 Length=882662 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || ||||||| || |||||||| || || ||||| | || | | Sbjct 752563 AGTCTCAACACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTC----AAAGTACAT 752618 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGA---TTCCT 288372 |||||||| | || || || || |||||||| | ||| |||| || | ||||| Sbjct 752619 CCGTCTTCCAGTTACTTGCCAGCAAAGATCAGTCT---TTGCCAATCAGGAAGAATTCCT 752675 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || ||||||||||| | || || || || ||| | | ||| | ||| || | ||| Sbjct 752676 TCCTTATCCTGGATCCTGGCCTTTACATTATCTGTTGTATCCGAGGGTTCAACCTTGAGA 752735 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||| || || || |||| ||| |||||||| Sbjct 752736 GTGATGGTCTTCCCAGTAAGGGTTTTGATGAAAATCTGCAT 752776 >seq9721 Length=1014 Score = 91.5 bits (100), Expect = 3e-13 Identities = 221/329 (67%), Gaps = 12/329 (4%) Strand=Plus/Minus Query 52724 AAACTCGCCAAAGAACTGGGAGTTGTGATTCCGATTCCTTTCTTCGAGAAAGATGGGAAC 52783 || || || || || ||||| || ||||| ||| || ||||| ||| ||| || Sbjct 746 AAGCTGGCAAAGGAGCTGGGTGTAGTGATACCGGTTAGCTTCTTTGAGGAAGCA---AAT 690 Query 52784 AATT---ATTACAATTCCGTCGCTGTCGCGGATGCCGATGGTTCTATCGTAGGTGTTTAC 52840 ||| ||||||| || | || | ||||| ||||| || | | || ||||| Sbjct 689 AATGCACATTACAACTCAATAGCCATTATCGATGCTGATGGAACTGACCTTGGGGTTTAT 630 Query 52841 AGAAAAACTCATATCCCTCAGAGCAAGTGTTACGAAGAGAAATTTTACTTTACACCGAGT 52900 || || | ||||| ||| | | ||||| ||||||| ||||| || | || | Sbjct 629 AGGAAGTCGCATATTCCTGATGGACCTGGTTACCAAGAGAAGTTTTATTTCAATCCTGGA 570 Query 52901 AGCAATCCGTATGAAGTTTTTGAAACGAAATATGGAAAACTAGGCGT-GCTGATTTGCTG 52959 || | | | | |||||| | || || | || |||| | ||||| ||| || || || Sbjct 569 GACACTGGCTTTAAGGTTTTTCAGACAAAGTTTGCAAAAATTGGCGTAGCT-ATATGTTG 511 Query 52960 GGATCAGTGGTTCTCTGAAGCAGCGAAATGTCTGGCTCTAGAAGGCGCTGA--TTTTATT 53017 |||||||||||| |||| ||||| | | |||||||| | || ||||| |||| || Sbjct 510 GGATCAGTGGTTTCCTGAGGCAGCTCGAGCTATGGCTCTACAGGGTGCTGAAGTTTTGTT 451 Query 53018 GTATACCCCACCGCCATCGGCTCGGAGCC 53046 ||| ||||||||||| || || || || Sbjct 450 TTAT--CCCACCGCCATTGGTTCTGAACC 424 >seq652 Length=450682 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369 || ||||| |||| | || || || || ||| |||| | || |||| | || ||| Sbjct 80922 GTACGTCCACCTTCCAGCTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGGAATT 80863 Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| |||||||| || || || || |||||||| | | | | ||| || || Sbjct 80862 CCTTCTTTCTCCTGGATCTTGGCCTTTACATTTTCTATTGTAGCCAAGGGTTCAACCTCC 80803 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||| ||| || || || || ||||| |||||||| Sbjct 80802 AGAGTGATGGTCTGCCCAGTAAGGGTTTTCACGAAAATCTGCAT 80759 >seq17446 Length=585 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| || | ||||| |||| || ||||| || || || || || || Sbjct 149 TCCACCTCTGAGCCTCAAGACGAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCCGC 90 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | ||| ||||| || || ||||| | ||||||| ||| Sbjct 89 TAGGGTTCGGCCATCTTCCAGTTGCTTTCCGGCAAATATCAGCCTCTGTTGATCTGGTGG 30 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTT 288394 || |||||||| ||||||||||| |||| Sbjct 29 TATACCTTCTTTGTCCTGGATTTTGGCTT 1 >seq37 Length=4917346 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/194 (71%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||||||| ||| | ||| ||| || || || | ||||| || || || Sbjct 765502 TCTTTCTGGATATTAGCGTCTGAGAG--TGCTGCCATCCTCCAGCTGTTTGCCCGCAAAA 765559 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | ||||| || || | || ||||||| ||||| || || Sbjct 765560 ATCAGACGCTGCTGCTCAGGCGGGATGCCCTCCTGGTCTTGGATTTGAGCTTTGACATTC 765619 Query 288403 TCTATAGAATC-----GCTCGA-TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||| || |||||| || || ||||| ||||| |||| |||||||| ||| Sbjct 765620 TCAGTAGTGTCACTGGGCTCGACCTCGACCTCGAGTGTGATGGTCTGGCCGGTCAGGGTC 765679 Query 288457 TTGACGAATATCTG 288470 || || || ||||| Sbjct 765680 TTCAC-AAGATCTG 765692 >seq17 Length=7276961 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| | |||||||| || ||||| ||| || || || | ||||| ||| | || Sbjct 4934301 TCTTTCTAGATATTATCATCTGCGAGAATGCAACCATCCTCCAGCTGTTTGCCTACAAAA 4934242 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||| ||| || | |||||| || || | ||||||||||| ||||| | || Sbjct 4934241 ATCAGACACTGCTGGTCAGGTGGGATGCCCTCCTAGTCCTGGATTTTAGCTTTGCCATTC 4934182 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | || || || | || || | || ||||| ||||| | |||||| |||| || Sbjct 4934181 TCAACAGTGTCACTGGGCTCCACCTTAAGTGTGATGGTCTTAGCAGTCAGACTCTTCACA 4934122 Query 288463 AATATCTGC 288471 || ||| || Sbjct 4934121 AAGATCGGC 4934113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178695562526642