Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq17663 93.3 5e-14
>seq17663
Length=579
Score = 93.3 bits (102), Expect = 5e-14
Identities = 130/181 (72%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| || ||||| || | ||| || || || || ||||| || |||
Sbjct 219 AGCAAAGTCACAGTGAAGCCCCTCATCTCTGGATATAAGCTCGTTTGAGAAAGTCAAACC 278
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| ||||| | |||||| | |||||| || |||||||| || |||||||||||
Sbjct 279 CGGCATAAGACCTCTCTTCTTAAGCCAGAAGATGGCACAAAAGCTTCCCGAGAAGAAGAT 338
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA-GCGGGACTTTGTATCAA 127697
|| || || || || || |||| || | | | ||||| || |||||||| ||| |
Sbjct 339 TCCTTCGACGCATGCAAAAGCAACCAGCCTCACAGCAAAAGACATAGGACTTTGAATCCA 398
Query 127698 A 127698
|
Sbjct 399 A 399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613020696459240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |