Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17663 93.3 5e-14 >seq17663 Length=579 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/181 (72%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| || ||||| || | ||| || || || || ||||| || ||| Sbjct 219 AGCAAAGTCACAGTGAAGCCCCTCATCTCTGGATATAAGCTCGTTTGAGAAAGTCAAACC 278 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| ||||| | |||||| | |||||| || |||||||| || ||||||||||| Sbjct 279 CGGCATAAGACCTCTCTTCTTAAGCCAGAAGATGGCACAAAAGCTTCCCGAGAAGAAGAT 338 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA-GCGGGACTTTGTATCAA 127697 || || || || || || |||| || | | | ||||| || |||||||| ||| | Sbjct 339 TCCTTCGACGCATGCAAAAGCAACCAGCCTCACAGCAAAAGACATAGGACTTTGAATCCA 398 Query 127698 A 127698 | Sbjct 399 A 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613020696459240