Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq25626 154 3e-32
seq19201 143 6e-29
seq10281 140 8e-28
seq21504 138 3e-27
seq475 136 9e-27
seq42717 131 4e-25
seq29432 131 4e-25
seq48301 125 2e-23
seq671 125 2e-23
seq58060 123 6e-23
seq59367 122 2e-22
seq69 116 9e-21
seq40511 114 3e-20
seq26062 113 1e-19
seq19370 111 4e-19
seq189 111 4e-19
seq58 111 4e-19
seq61295 104 6e-17
seq652 104 6e-17
seq419 104 6e-17
seq77 102 2e-16
seq142 96.9 8e-15
seq55541 95.1 3e-14
seq17446 89.7 1e-12
seq30 89.7 1e-12
seq683 84.2 5e-11
>seq25626
Length=405
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| || || ||||| || | |||||||||||| || | ||||||||| || || ||
Sbjct 350 CGAAGCCTGAGAACAAGATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTG 291
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| |||||||| ||||||||||| | | ||||||||||||| ||| ||
Sbjct 290 CGGCCGTCTTCAAGCTGCTTCCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCC 231
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| || | |||||||| | || || |||||
Sbjct 230 TCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAA 171
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || |||||||| |||||||| || ||
Sbjct 170 GTAATAGTCTTTCCGGTGAGAGTCTTCACAAAGATCTG 133
Score = 131 bits (144), Expect = 4e-25
Identities = 102/122 (84%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| || || ||||| || | ||||||||| ||||||| ||||||||||||||| ||
Sbjct 122 CGAAGCCTGAGAACAAGATGTAAAGTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTT 63
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || ||||| |||||||||||||||||||| | | ||||||||||||| ||| |||
Sbjct 62 CTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCT 3
Query 199529 TC 199530
||
Sbjct 2 TC 1
Score = 89.7 bits (98), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|||||||||||||||||| | ||||| || || || ||||| || |||||| |||| |||
Sbjct 31 ATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACATTGGCTGACTACAACATCCAAAAA 90
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
||||| ||| | || |||||| | || |||||
Sbjct 91 GAGTCGACTTTACATCTTGTTCTCAGGCTTCG 122
>seq19201
Length=536
Score = 143 bits (158), Expect = 6e-29
Identities = 163/218 (75%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | |||||||| |||
Sbjct 294 AGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTTCCGTCT 353
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || ||||| || || |||||||| ||||| |||||||| |||
Sbjct 354 TCCAGCTGCTTCCCCGCGAATATCAGCCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCC 413
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| ||||| | | ||| || || | || ||||||
Sbjct 414 TGGATCTTCGCCTTCACATTGTCGATCGTGTCGGACGATTCAACCTCTAGGGTTATCGTC 473
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| ||||| || ||||||||||| || || ||||||
Sbjct 474 TTCCCCGTTAGGGTTTTCACAAAGATCTG---CATTTT 508
>seq10281
Length=966
Score = 140 bits (154), Expect = 8e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||| || || |||||||| |||| |||||||||||||||||||
Sbjct 711 CGGAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTC 652
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| ||||||||||| || ||||| | | |||||| ||||| || |||
Sbjct 651 CGGCCGTCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCCGGTGGGATGCCT 592
Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| || || || ||| || |||||| |||| ||| || | | || || |||||
Sbjct 591 TCTTTGTCTTGGAT-TTTGGCTTTCACGTTGTCGATGGTATCAGAGCTCTCCACCTCCAA 533
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| ||||| | ||||| ||||| |||||
Sbjct 532 AGTAATCGTCTTCCCCGTCAAGGTTTTAACAAAGATTTG 494
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| |||||||| || |||| ||||||||||||||| || | |||||
Sbjct 930 AGAACCAAGTGGAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCC 871
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| |||||||||||||||||||||||||| || |||||| ||
Sbjct 870 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATACCTTCTTTGTCT 811
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| |||| || || | | || || |||| ||||| |||
Sbjct 810 TGGATTTTAGCCTTGACGTTGTCGATAGTATCAGAACTCTCGACCTCCAGAGTGATGGTC 751
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || || || || ||
Sbjct 750 TTCCCCGTAAGGGTCTTGACGAAGATCTG 722
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| || || || || || || ||||||||||| |||| |||||||||||| | ||||
Sbjct 483 CGAAGCCTGAGCACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTC 424
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||||||||| ||||| | | ||||||||||| || ||
Sbjct 423 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGTATACCC 364
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || ||||| || ||| ||| ||||||||||| | | || || || |
Sbjct 363 TCCTTATCTTGAATTTTAGCCTTGACGTTGTCGACGGTGTCGGAGCTCTCGACCTCGAGG 304
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| || ||||| || || || ||
Sbjct 303 GTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTG 266
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || || ||||| | |||||| || ||||| || |||| ||||||||| ||||||||
Sbjct 255 CGGAGCCTGAGGACCAAGTGGAGCGTGGACTCTTTCTGGATGTTGTAGTCGGCCAAAGTT 196
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| ||||| || ||||||||||| || | |||||||||||| || |||
Sbjct 195 CGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATGCCT 136
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| || ||| |||| |||||| | |||| || || |
Sbjct 135 TCCTTATCCTGGATCTTGACTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGG 76
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTT 199614
||||| ||||| || |||||||| ||
Sbjct 75 GTGATTGTCTTTCCGGTGAGAGTCTT 50
>seq21504
Length=484
Score = 138 bits (152), Expect = 3e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| || ||||| ||||| |||| ||||||||| |||||||| | |||||
Sbjct 454 AGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCATCC 395
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||||||||||||||||||||| || || || |||
Sbjct 394 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 335
Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||| ||| || |||||| || | |||||| | | || || || | ||||| ||
Sbjct 334 TGAAT-TTTGGCTTTCACGTTATCAATGGTGTCAGAGCTCTCCACTTCGAGGGTGATAGT 276
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || || || |||||
Sbjct 275 CTTGCCTGTAAGGGTCTTGACGAAGATTTG 246
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||| || || ||||| || |||| |||||||||||| | |||
Sbjct 235 CGGAGACGCAAGACCAAGTGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTT 176
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||| || ||||||||||||||||| | | ||||||||||| || |||
Sbjct 175 CGTCCATCTTCGAGTTGCTTTCCGGCGAAGATTAACCTTTGCTGGTCCGGTGGGATGCCT 116
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| ||||| | | || || || |
Sbjct 115 TCCTTGTCCTGTATCTTGGTTTTCACGTTGTCGATAGTGTCGGAGCTCTCCACCTCGAGG 56
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || || || || ||
Sbjct 55 GTGATCGTCTTTCCGGTGAGTGTCTTGACGAAGATCTG 18
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
||||||||||||||||| | ||||||||| | ||| | || || |||||| ||||||||
Sbjct 144 ATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACTCTTGCTGACTACAACATCCAGAAA 203
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
||||| || |||||| | || ||| | || ||
Sbjct 204 GAGTCAACACTTCACTTGGTCTTGCGTCTCCG 235
>seq475
Length=1570329
Score = 136 bits (150), Expect = 9e-27
Identities = 162/219 (74%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || |||||||| || |||| ||||||||||| | ||| | |||||
Sbjct 1256092 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 1256033
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || |||||||| | ||||||||| || || || || ||
Sbjct 1256032 TTCCAGCTGCTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATC 1255973
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| | | || || |||| ||||| ||
Sbjct 1255972 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 1255913
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| || || || || ||||| |||||||| ||||||
Sbjct 1255912 CTTGCCAGTCAGGGTCTTCACGAAAATTTG---CATTTT 1255877
>seq42717
Length=256
Score = 131 bits (144), Expect = 4e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| || || ||||| || | ||||||||||||||| | |||||||||||||||||||
Sbjct 173 CGAAGCCTGAGAACAAGATGTAAAGTCGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTC 114
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| || || |||||||||||||| || | |||||| |||||| || |||
Sbjct 113 CGGCCATCTTCAAGTTGTTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGGATGCCT 54
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 53 TCCTTGTCCTGGATCTT 37
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
||||||||||||||||| || | |||||||| |||||||||| || |||||| | ||
Sbjct 79 CTTATCTTCGCCGGAAAACAACTTGAAGATGGCCGGACTTTGGCTGACTACAACATTCAA 138
Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
|| ||||| ||| | || |||||| | || |||||
Sbjct 139 AAGGAGTCGACTTTACATCTTGTTCTCAGGCTTCG 173
>seq29432
Length=351
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
|| |||| ||||| || || || || || || |||| |||||||||||||||||| |
Sbjct 121 AGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCAGCCAAAGTACGC 180
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|| ||||| ||||| ||||| |||||||| | |||||||| |||||| |||||||||
Sbjct 181 CCGTCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGAGGGATTCCTTCT 240
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| || ||||| ||| || |||| |||||| | | || || || | |||
Sbjct 241 TTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTG 300
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || |||||||| || || ||
Sbjct 301 ATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTG 335
>seq48301
Length=236
Score = 125 bits (138), Expect = 2e-23
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || ||||||||||| |||| ||||||||||||||| ||
Sbjct 212 CGAAGACGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTG 153
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||||||||| |||||||||||||| ||||||||||| ||| |||
Sbjct 152 CGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGGGGAATACCT 93
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 92 TCCTTGTCCTGGATCTT 76
>seq671
Length=818080
Score = 125 bits (138), Expect = 2e-23
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| || || || ||||| ||||||||||| | ||||||||||| ||||||
Sbjct 168636 CGAAGTCTCAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 168577
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||||||||||||| || || ||||| || | ||||| | ||| |||||||
Sbjct 168576 CATCAATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGAGCAGGAGGAATTCCT 168517
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| |||| ||| | ||| | || | | | ||| || || |
Sbjct 168516 TCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAACCTCAAGG 168457
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAA 199622
||||| ||||| || || || |||||||| ||||
Sbjct 168456 GTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAA 168423
Score = 91.5 bits (100), Expect = 3e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || |||||| |||||||| || | |||||| | || ||||||
Sbjct 168537 AAAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATTGATGTACTTTGTCTGACTACAACA 168596
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
| || || ||||| |||||||| || || |||||||||||
Sbjct 168597 TTCAAAAGGAGTCCACTCTTCATCTGGTGTTGAGACTTCG 168636
>seq58060
Length=210
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || || || || | ||| || |||||||| || || | ||||||||||||||||||
Sbjct 188 CGGAGCCTGAGAACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGTG 129
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| || |||||||||||||||||||||||||| || |||
Sbjct 128 CGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCT 69
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| || | |||||| | | || || |||||
Sbjct 68 TCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATGGTGTCGGAGCTCTCCACTTCCAAG 9
Query 199589 GTGATCGT 199596
||||| ||
Sbjct 8 GTGATAGT 1
>seq59367
Length=207
Score = 122 bits (134), Expect = 2e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| || || || || || | ||||||||||||||||| ||||||||| ||||||||
Sbjct 152 CGAAGCCTGAGAACGAGATGTAAAGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAAGTT 93
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || ||||| || || ||||||||||||||||| | |||||| ||||| || |||
Sbjct 92 CTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATACCT 33
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 32 TCCTTATCCTGGATCTT 16
>seq69
Length=3989787
Score = 116 bits (128), Expect = 9e-21
Identities = 158/219 (72%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| ||| ||| ||||| || || || ||||||||| | | | ||||| ||| || |||
Sbjct 665508 CGCAGTGTCAACACAAGATGAAGGGTGGACTCCTTTGGAATGCTGTAGCCAGACACAGTG 665449
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCT-GCTGGTCCGGAAAAATTCC 199527
| |||| ||||||| ||||| || || ||||| || | | |||| || ||| |||||||
Sbjct 665448 CGTCCAGCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTTGCTGATCAGGAGAAATTCC 665389
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|||| ||||| |||| ||| || ||| | || || | | ||| || || |
Sbjct 665388 TTCTTTATCCTGGATCTGGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAG 665329
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||||||||| ||||| ||
Sbjct 665328 GGTGATGGTCTTCCCAGTAAGAGTTTTCACGAAAATCTG 665290
>seq40511
Length=266
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || || || || || || || ||||||||||| |||| |||||||||||| | |||
Sbjct 206 CGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTT 147
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || || |||||||||||||| || || | |||||||||||| |||||
Sbjct 146 CGGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCCGGTGGGATTCCC 87
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || || || ||| ||| || | ||||| | |||| || || |
Sbjct 86 TCCTTGTCTTGGATTTTGGCCTTGACGTTGTCTATCGTGTCAGAGCTTTCCACCTCGAGT 27
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTT 199614
||||||||||| || |||||||| ||
Sbjct 26 GTGATCGTCTTTCCGGTGAGAGTCTT 1
>seq26062
Length=398
Score = 113 bits (124), Expect = 1e-19
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || || ||||| | ||| || ||||||||||| |||| ||| ||||||||||||||
Sbjct 107 CGGAGCCTGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCAGCCAAAGTG 48
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515
| ||||| || ||||| || || |||||||||||||||||||||||
Sbjct 47 CGACCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTC 1
>seq19370
Length=533
Score = 111 bits (122), Expect = 4e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
||| ||||| |||||||| || || || || ||||| | |||||||| ||||| || |
Sbjct 204 AAGCCTCAGCACAAGGTGCAGTGTAGATTCTTTTTGAATATTGTAGTCGGCCAAGGTACG 145
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||||| || ||||| |||||||||||||| | | |||||| |||||| || |||||
Sbjct 144 GCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTC 85
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
|| ||||| || ||| || |||| |||||| | | || || || | ||
Sbjct 84 CTTGTCTTGAATTTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGT 25
Query 199591 GATCGTCTTACCCGTGAGAGTTTT 199614
||| ||||| || || || |||||
Sbjct 24 GATGGTCTTGCCGGTTAGGGTTTT 1
>seq189
Length=4153236
Score = 111 bits (122), Expect = 4e-19
Identities = 156/218 (72%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||| ||| ||||| || ||||| |||||||||| | ||||||||||| ||| ||
Sbjct 1285436 CGAAGTGTCAACACAAGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGACAAGGTA 1285377
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| ||||| || || ||| | || | ||||| || ||| |||||||
Sbjct 1285376 CATCCATCTTCCAGTTGCTTGCCAGCAAAG-TCAGTCTTTGCTGATCAGGAGGAATTCCT 1285318
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| || || ||| || |||| | ||| || || |
Sbjct 1285317 TCCTTATCCTGGATCTTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACCTCAAGA 1285258
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| ||| ||||| || || || |||| || ||||| ||
Sbjct 1285257 GGGATGGTCTTCCCAGTAAGGGTTTCCATGAAAATCTG 1285220
>seq58
Length=4472761
Score = 111 bits (122), Expect = 4e-19
Identities = 156/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| ||||| || ||||| ||||||||| | | ||||||||||| || ||
Sbjct 4394505 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTGGAATGTTGTAGTCAGACA--GTG 4394562
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||| |||||| ||||| || || ||| | || | ||||| | ||| |||||||
Sbjct 4394563 CGTCCAGCTTCCACTTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGCAATTCCT 4394622
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| |||||| ||| | ||| | || || | ||| || || |
Sbjct 4394623 TCCTTATCCTGGATCTTTGTCTTTATATTTTCTATTGTATCCAAGGGTTCAACCTCGAGG 4394682
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || || || |||||||||||||| ||
Sbjct 4394683 GTGATAGTTTTCCCAGTAAGGGTTTTCACAAAAATCTG 4394720
>seq61295
Length=203
Score = 104 bits (114), Expect = 6e-17
Identities = 120/162 (74%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 199465 AGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAAT 199524
||| || || ||||| |||||||| ||||||||||| | | ||||||||||||| |||
Sbjct 201 AGTTCTGCCGTCTTCAAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAAT 142
Query 199525 TCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATC 199584
|| || ||||| ||||| ||| ||| || | |||||| | | || || ||
Sbjct 141 ACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGAGCTCTCCACCTC 82
Query 199585 CAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| || |||||||| |||||||| || ||
Sbjct 81 CAAAGTAATGGTCTTTCCGGTGAGAGTCTTCACAAAGATCTG 40
>seq652
Length=450682
Score = 104 bits (114), Expect = 6e-17
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||| | ||||| |||||||| ||||| | |||| |||| |||||| | |||||||
Sbjct 80975 CGAGGGCTCAGCACAAGGTGAAGAGTGGGTGCCTTC-GGAC--TGTAGTAA-CCAAAGTA 80920
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||| ||||||||||||| || || ||| | || | ||||| | ||| |||||||
Sbjct 80919 CGTCCACCTTCCAGCTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGGAATTCCT 80860
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| |||||| ||||| ||| || ||| | || | | ||| || ||||
Sbjct 80859 TCTTTCTCCTGGATCTTGGCCTTTACATTTTCTATTGTAGCCAAGGGTTCAACCTCCAGA 80800
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||| || || || |||||||| ||||| ||
Sbjct 80799 GTGATGGTCTGCCCAGTAAGGGTTTTCACGAAAATCTG 80762
>seq419
Length=824084
Score = 104 bits (114), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||||| ||||| | ||||| ||||||||||| | ||||||||||| || ||| |
Sbjct 83745 AGTCTCAACACAAGATAAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTGTGT 83686
Query 199472 CCATC-TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||||| |||||| ||||| || || ||||| || | | | | || ||| |||| ||||
Sbjct 83685 CCATCTTTCCAGTTGCTTGCCAGCAAAGATCAGTCTGTACAGATCAGGAGGAATTTCTTC 83626
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
||||| ||||| ||| || ||| || || | | ||| || || | ||
Sbjct 83625 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCAACCTCGAGGGT 83566
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAA 199622
||| ||||| || || || |||||||| ||||
Sbjct 83565 GATGGTCTTCCCAGTAAGGGTTTTCACGAAAA 83534
>seq77
Length=5608019
Score = 102 bits (112), Expect = 2e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| | ||||||| | | ||||||||||| |||||| |
Sbjct 2407054 GAAGTCTCAACACAAGATGAAGAGTGGTCTCCTTTGGAATGTTGTAGTCAGACAAAGTGC 2407113
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||| ||||||| ||||| || || ||||| || ||||| || ||| ||||||||
Sbjct 2407114 GTCCAGCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTT 2407173
Query 199530 CTCGCTCCTGAATC 199543
| ||||| |||
Sbjct 2407174 CCTTATCCTGGATC 2407187
>seq142
Length=3748655
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| |
Sbjct 2343178 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 2343119
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|| |||||| | | ||| || || ||| | || | || | || ||| ||||||||
Sbjct 2343118 GTCTATCTTC--GTTTCTTGCCAGCAAAGCTCAGTCTTTGTTAATCAGGAGGAATTCCTT 2343061
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
|| ||||| |||| ||| || ||| | || || | ||| || || | |
Sbjct 2343060 CTTTATCCTGGGTCTTGGTCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAG 2343001
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| | || | || || |||||||| ||||| ||
Sbjct 2343000 TGATGGATTTCCAAGTAAGGGTTTTCACGAAAATCTG 2342964
>seq55541
Length=216
Score = 95.1 bits (104), Expect = 3e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || || || || || || || |||||||||||||| | |||||||||||| | |||
Sbjct 156 CGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTTTGTATGTTGTAGTCAGCGAGAGTT 97
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || || ||||||||||| ||||| | | ||| ||||||||| ||||||
Sbjct 96 CGGCCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGTTGGTCCGGAGGAATTCCC 37
Query 199529 TC 199530
||
Sbjct 36 TC 35
>seq17446
Length=585
Score = 89.7 bits (98), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| || || ||||||||||| |||||||||| | || | || ||||||||| | |||
Sbjct 48 CTGATATTTGCCGGAAAGCAACTGGAAGATGGCCGAACCCTAGCGGATTACAACATTCAG 107
Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACT 201026
|||||||||||||||||||| || ||||| ||
Sbjct 108 AAAGAGTCTACTCTTCACCTCGTCTTGAGGCT 139
>seq30
Length=5842064
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | ||||||||||| |||||| | |||||||||||||||||| || || ||||
Sbjct 5347491 CCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 5347432
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || | ||||| || ||| |||||||
Sbjct 5347431 TCAGTCTTTGCTGATCAGGAGGAATTCCT 5347403
>seq683
Length=758919
Score = 84.2 bits (92), Expect = 5e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| ||||| ||||| || |||| ||| ||||| | | ||| | |||||
Sbjct 117140 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATGTTATAGTCTGAGAGAGTGCGGCCATCC 117199
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || || || ||| |||||||||| || || || || ||
Sbjct 117200 TCCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 117259
Query 199538 TGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| || ||| |||| || ||| | ||||| | | | || || | ||||| ||
Sbjct 117260 TGGAT-TTTGGCTTTGACATTTTCAATAGTGTCACTGGGCTTGACCTCGAGTGTGATGGT 117318
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| || ||||||||||| || ||
Sbjct 117319 CTTGCCCGTCAGGGTTTTCACAAAGATCTG 117348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177963358155413
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