Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq17663 96.9 4e-15 >seq17663 Length=579 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Minus Query 102153 TTTGATACAAAGTCGCGT-TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 102211 || ||| ||||||| | || ||||||| | | || | || ||||| || || || || Sbjct 399 TTGGATTCAAAGTCCTATGTCTTTTGCTGTGAGGCTGGTTGCTTTTGCATGCGTCGAAGG 340 Query 102212 TATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC 102271 ||||||||||| || ||| || || || | ||||| |||||| ||||||| ||||| Sbjct 339 AATCTTCTTCTCGGGAAGCTTTTGTGCCATCTTCTGGCTTAAGAAGAGAGGTCTTATGCC 280 Query 102272 AGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| | ||||| ||||||||||| || | || ||||| || ||| || ||||| Sbjct 279 GGGTTTGACTTTCTCAAACGAGCTTATATCCAGAGATGAGGGGCTTCACTGTGACTTTGC 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620250159036080