Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq7702 129 1e-24 >seq7702 Length=1240 Score = 129 bits (142), Expect = 1e-24 Identities = 342/512 (67%), Gaps = 19/512 (4%) Strand=Plus/Plus Query 150284 ACTAACCTAACTGATCTTGCAGCAGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACT 150343 |||||||| ||| | || |||| || |||||||| |||||| | |||| | | | Sbjct 138 ACTAACCTGACTAAACTAGCAGAGGAGGGTAAACTCGATCCAGTTGTTGGAAGGCAGCCA 197 Query 150344 GAACTTGATGATCTAATTCAGATTCTTTCTCGTAAAACCAAAAAGAATG-GTGCGTTAGT 150402 || |||| | | ||||| | ||| | |||||| || ||| ||| ||| | Sbjct 198 CAAATTGAACGAGTTGTCCAGATCTTGGGTCGAAGAACCAAGAATAATCCGTGTCTTA-T 256 Query 150403 TGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAA 150462 ||| ||||| || |||||||| ||| || | ||| ||| | || || | || |||| Sbjct 257 TGGAGAACCTGGAGTTGGTAAGACAGCTATAGCTGAAGGACTCGCTCAGAGAATTGCTAG 316 Query 150463 TGGTGATGTTCCAGATTCTA-TGA----AAGATGTTGAAATTCTTTCTTTGAATATGGGT 150517 |||||||||||| || | | ||| |||| | | | | | || |||||||| Sbjct 317 TGGTGATGTTCCTGAAACAACTGAGGGGAAGACGGTTATAACCCTTG-----ATATGGGT 371 Query 150518 GCATTTACTG-CTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCT 150576 | | || || |||| || ||||||||||| |||||||| ||| | | | || | | Sbjct 372 -CTTCTAGTGGCTGGAACCAAGTATCGTGGAGAATTCGAGGAAAGATTGAAGAAGCTTAT 430 Query 150577 ACAAGAACTAAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTAT 150636 | || | | | || | ||||| | |||||||| || |||||| | || ||| | || Sbjct 431 GGAGGAGATCAGACAAAGTGATGACATCATTCTGTTTATTGATGAAGTGCACACTCTGAT 490 Query 150637 GGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCT 150696 ||||| || || | || ||| | | ||| ||| || ||||| || ||||| Sbjct 491 CGGTGCAGGAGCCGC---CGAAGGTGCCATTGATGCTGCCAACATCTTAAAGCCAGCTCT 547 Query 150697 ATCTCGCGGTGAAATTC-GTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACA 150755 | | |||||| | | |||| || ||||||||||| | ||||| || | || |||| Sbjct 548 TGCAAGAGGTGAATTGCAGTGT-ATTGGTGCAACAACATTGGATGAGTACAGAAAGCACA 606 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTC 150787 |||| |||||| | ||| | |||| || ||| Sbjct 607 TTGAGAAAGATCCTGCATTGGAGCGACGGTTC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146657624536622