Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=9954913 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| |||||||| | || || ||| | ||| |||||||| |||| |||| || Sbjct 229305 TCCAGCATCTGGGGGCCCACGTGTGACGGCCTCGATCGCATTGTTGAGCGCTGTGGCTTG 229246 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || |||||||||||| | | ||||| ||||||| ||||||| | | | Sbjct 229245 CCGGAGATGCAGGTGGGCGACTGGATGCTTTTTGAGGACATGGGTGCTTACACCGTCGCT 229186 Query 21242 AGCTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296 | |||| || || ||||| || ||| || | || | | ||||||| || |||| Sbjct 229185 GCCGCTTCTACTTTCAACGGGTT-CCAGAGGCCGACCATCTACTATGTGATGTCAG 229131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463178014133520