Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq65 102 1e-16 >seq65 Length=9174866 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | || | |||||||||| | ||||||||||||| || ||||| || || || Sbjct 3588732 GATAGCTGGTGCTCTGTGGTGGTACTTTGTATCTAAAGGGATTGAGTACTTGGACACGGT 3588791 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||| || || ||||| || ||| || || || || || ||||| ||||| | Sbjct 3588792 GTTTTTTATTCTGAGGAAGAAAAATAACCAAGTCTCTTTCCTTCATGTATACCATCACTG 3588851 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || |||||||| || | ||| | || ||||| ||| | ||||| || || Sbjct 3588852 CACAATGTTTACGTTGTGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACA 3588902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902694806211040