Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 5e-11 >seq3 Length=9954913 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131862 TTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTT 131921 ||||||||||||| || ||||| || |||||||| ||| |||| | || || | Sbjct 27105 TTGTAGCTTTTGCCGCAGTAGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCT 27164 Query 131922 GGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAG 131981 |||| ||||| || ||| |||||||||| ||| |||| |||||| || | || |||| Sbjct 27165 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAG 27224 Query 131982 ATGA 131985 |||| Sbjct 27225 ATGA 27228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185848144091879