Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq17663 96.9 4e-15
>seq17663
Length=579
Score = 96.9 bits (106), Expect = 4e-15
Identities = 215/315 (68%), Gaps = 7/315 (2%)
Strand=Plus/Plus
Query 129884 GAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCC 129943
|||||||| || || || | |||||| || || | ||| ||| | ||||||| |||
Sbjct 88 GAGTTCATTCCAATAAGATCACATGGAAGGGCCTTGCAGACAAACTCTGTCTCAATTTCC 147
Query 129944 ACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGT-GCCAGGT-CTATTGC-GCAAAGTC 130000
|| || || | || || | || ||||| | || | || ||| ||||| |
Sbjct 148 ACTGCCTCATGAACAATCTGATAAACTTTCTCCACAGGGAGCTGCTTCTGCAGCAAACTG 207
Query 130001 TTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 130060
| ||||| || | |||| || ||| || ||||| || | ||| || || || ||
Sbjct 208 TACAAGAGA--CAAG-CAAAGTCACAGTGAAGCCCCTCATCTCTGGATATAAGCTCGTTT 264
Query 130061 GAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAG 130120
||||| || ||| ||||| ||||| | |||||| | |||||| || ||||||||
Sbjct 265 GAGAAAGTCAAACCCGGCATAAGACCTCTCTTCTTAAGCCAGAAGATGGCACAAAAGCTT 324
Query 130121 CCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCG 130179
|| ||||||||||| || || || || || || |||| || | | ||||||| ||
Sbjct 325 CCCGAGAAGAAGATTCCTTCGACGCATGCAAAAGCAACCAGCCTCACAGCAAAAGACATA 384
Query 130180 GGACTTTGTATCAAA 130194
|||||||| ||| ||
Sbjct 385 GGACTTTGAATCCAA 399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 617944788616840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |