Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq17663 114 1e-20 >seq17663 Length=579 Score = 114 bits (126), Expect = 1e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 |||||||||||||| ||||||||||||||||| || || ||||| || |||||||| Sbjct 359 GCTTTTGCATGCGTCGAAGGAATCTTCTTCTCGGGAAGCTTTTGTGCCATCTTCTGGCTT 300 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 || ||| | || || |||||||| ||| |||||| |||||||| || ||| | || ||| Sbjct 299 AAGAAGAGAGGTCTTATGCCGGGTTTGACTTTCTCAAACGAGCTTATATCCAGAGATGAG 240 Query 60111 GGCCTCCA 60118 || || || Sbjct 239 GGGCTTCA 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548089826690160