Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq10281 163 7e-35
seq29432 161 2e-34
seq21504 143 6e-29
seq48301 136 9e-27
seq19201 136 9e-27
seq19370 134 3e-26
seq25626 131 4e-25
seq671 131 4e-25
seq58060 129 1e-24
seq273 123 6e-23
seq42717 120 7e-22
seq61295 109 1e-18
seq59367 109 1e-18
seq40511 107 5e-18
seq58 100 7e-16
seq893 98.7 2e-15
seq683 98.7 2e-15
seq342 95.1 3e-14
seq154 91.5 4e-13
seq436 89.7 1e-12
seq328 89.7 1e-12
seq55541 87.8 4e-12
seq377 86.0 1e-11
>seq10281
Length=966
Score = 163 bits (180), Expect = 7e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || || ||||| | |||||| ||||| ||||| |||| ||||| |||||||||||
Sbjct 256 ACGGAGCCTGAGGACCAAGTGGAGCGTGGACTCTTTCTGGATGTTGTAGTCGGCCAAAGT 197
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || ||||| ||||| || || ||||||||||| | || ||||| ||||| || ||
Sbjct 196 TCGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATGCC 137
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| || || ||||||||||| ||| ||||||| || |
Sbjct 136 TTCCTTATCCTGGATCTTGACTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAG 77
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| ||||| || || | ||| || |||||
Sbjct 76 GGTGATTGTCTTTCCGGTGAGAGTCTTAATGAA 44
Score = 138 bits (152), Expect = 3e-27
Identities = 166/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || ||| | ||| || || || || || |||| ||||| || ||||||||
Sbjct 712 ACGGAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGT 653
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| |||||||| || || ||||| | || || || || || || || ||
Sbjct 652 CCGGCCGTCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCCGGTGGGATGCC 593
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| ||||||||||| ||| || ||||| |||||||| || ||| | ||||| || |
Sbjct 592 TTCTTTGTCTTGGAT-TTTGGCTTTCACGTTGTCGATGGTATCAGAGCTCTCCACCTCCA 534
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| || |||||||| |||||||| ||||| | || | ||||||
Sbjct 533 AAGTAATCGTCTTCCCCGTCAAGGTTTTAACAAAGATTTGCAT 491
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| || || ||||| |||| ||||| || ||||| || | |||||
Sbjct 930 AGAACCAAGTGGAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCC 871
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || |||||||| ||||||
Sbjct 870 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATACCTTCTTTGTCT 811
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| || ||||| || || || | || || || | ||||| |||
Sbjct 810 TGGATTTTAGCCTTGACGTTGTCGATAGTATCAGAACTCTCGACCTCCAGAGTGATGGTC 751
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| | || || | ||| | |||||
Sbjct 750 TTCCCCGTAAGGGTCTTGACGAAGATCTGCAT 719
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| || || || || || || || || || || |||| ||||| || || | |||
Sbjct 484 ACGAAGCCTGAGCACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGT 425
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || || ||||| | | ||| ||||| || || |||||
Sbjct 424 CCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGTATACC 365
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||| || || ||| || |||| |||||| ||| | || || || |
Sbjct 364 CTCCTTATCTTGAATTTTAGCCTTGACGTTGTCGACGGTGTCGGAGCTCTCGACCTCGAG 305
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| ||||| | ||||| | ||| | |||||
Sbjct 304 GGTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 263
>seq29432
Length=351
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| |||| ||||| || || ||||||||||| |||| ||||| || |||||||| | |
Sbjct 121 AGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCAGCCAAAGTACGC 180
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| ||||| || ||||||||||| | ||| || || || || || || |||||
Sbjct 181 CCGTCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGAGGGATTCCTTCT 240
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||||||||| ||| ||| ||||||||||| |||| || || || | |||
Sbjct 241 TTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTG 300
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTT 225722
|| |||||||| || | ||||| | ||| | ||||| || ||||
Sbjct 301 ATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTTGGGTT 347
>seq21504
Length=484
Score = 143 bits (158), Expect = 6e-29
Identities = 161/213 (76%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| || || ||||| || |||| ||||| ||||||||||| | |||||
Sbjct 454 AGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCATCC 395
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || || || ||||||||
Sbjct 394 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 335
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| || ||| || ||||| || |||||||| ||| | ||||| || | ||||| ||
Sbjct 334 TGAAT-TTTGGCTTTCACGTTATCAATGGTGTCAGAGCTCTCCACTTCGAGGGTGATAGT 276
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| || | || || | ||| | ||||||
Sbjct 275 CTTGCCTGTAAGGGTCTTGACGAAGATTTGCAT 243
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || ||| | ||| || || || ||||| |||| ||||| || || | |||
Sbjct 236 ACGGAGACGCAAGACCAAGTGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCAAGAGT 177
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| |||||||| || ||||| || |||||||| | | ||| ||||| || || || ||
Sbjct 176 TCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATTAACCTTTGCTGGTCCGGTGGGATGCC 117
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| || ||||| ||||| ||||| ||||| ||| | ||||| || |
Sbjct 116 TTCCTTGTCCTGTATCTTGGTTTTCACGTTGTCGATAGTGTCGGAGCTCTCCACCTCGAG 57
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || || | || || | ||| | |||||
Sbjct 56 GGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 15
>seq48301
Length=236
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || || || || || |||| ||||| || ||||| ||
Sbjct 213 ACGAAGACGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGT 154
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||||
Sbjct 153 GCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGGGGAATACC 94
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| |||||||| || || || || || || ||| | ||||| || |
Sbjct 93 TTCCTTGTCCTGGATCTTAGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCACCTCAAG 34
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| ||||| || ||||| || || | |||
Sbjct 33 AGTGATGGTCTTCCCGGTCAATGTCTTAACGAA 1
>seq19201
Length=536
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| |||||||| || | || || || |||
Sbjct 294 AGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTTCCGTCT 353
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| ||||| || || || || || || || || || |||||||||||
Sbjct 354 TCCAGCTGCTTCCCCGCGAATATCAGCCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCC 413
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||| ||||| || | ||| || |||| || ||||||
Sbjct 414 TGGATCTTCGCCTTCACATTGTCGATCGTGTCGGACGATTCAACCTCTAGGGTTATCGTC 473
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| | ||||| | || | ||||||||
Sbjct 474 TTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 508
>seq19370
Length=533
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| ||||| |||||||| || || ||||||||||| | |||||| |||||||| || |
Sbjct 204 AAGCCTCAGCACAAGGTGCAGTGTAGATTCTTTTTGAATATTGTAGTCGGCCAAGGTACG 145
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
||||| || ||||| || || |||||||| | | || || || || || || |||||
Sbjct 144 GCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTC 85
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
||||||||| || || ||| ||| ||||||||||| | | || || || | ||
Sbjct 84 CTTGTCTTGAATTTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGT 25
Query 225675 GATCGTCTTGCCCGTCAAAGTTTT 225698
||| |||||||| || | |||||
Sbjct 24 GATGGTCTTGCCGGTTAGGGTTTT 1
>seq25626
Length=405
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| || || ||||| || | ||| || || || || | ||||| ||||| || ||
Sbjct 351 ACGAAGCCTGAGAACAAGATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGT 292
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| ||||||||||| |||||||| | || || ||||| || ||||||||
Sbjct 291 GCGGCCGTCTTCAAGCTGCTTCCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACC 232
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| || || |||||||||||| | || || || ||
Sbjct 231 CTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAA 172
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || ||||| || || | ||| ||
Sbjct 171 AGTAATAGTCTTTCCGGTGAGAGTCTT 145
Score = 109 bits (120), Expect = 1e-18
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| || || ||||| || | ||| || |||||||||| ||||| || ||||| ||
Sbjct 123 ACGAAGCCTGAGAACAAGATGTAAAGTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGT 64
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| || ||||| |||||||| || |||||||| | || || ||||| || ||||||||
Sbjct 63 TCTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACC 4
Query 225612 TTC 225614
|||
Sbjct 3 TTC 1
>seq671
Length=818080
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| || || || |||||||| || ||||| | ||||| || | ||||||
Sbjct 168637 ACGAAGTCTCAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 168578
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| | |||||| |||||||| ||||| ||||| |||| ||| || | || ||||| ||
Sbjct 168577 ACATCAATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGAGCAGGAGGAATTCC 168518
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||| |||| ||| | | ||| || || | |||| ||| || || |
Sbjct 168517 TTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAACCTCAAG 168458
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || || | ||||| | ||| | ||||| ||
Sbjct 168457 GGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAAGCTGCATCTT 168413
>seq58060
Length=210
Score = 129 bits (142), Expect = 1e-24
Identities = 142/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || || || || | ||| || || || ||||| || | ||||| || ||||||||
Sbjct 189 ACGGAGCCTGAGAACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGT 130
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||||||||||||||| || || || ||||| || || || ||
Sbjct 129 GCGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCC 70
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| |||||||| ||| || || |||||||| ||| | ||||| || ||
Sbjct 69 TTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATGGTGTCGGAGCTCTCCACTTCCAA 10
Query 225672 CGTGATCGT 225680
||||| ||
Sbjct 9 GGTGATAGT 1
>seq273
Length=4066651
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| |||||||| ||||| |||| ||||| |||| || || | || ||
Sbjct 887203 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTC 887262
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | ||| || || || ||||| | | || ||||| || || || || || |||||
Sbjct 887263 TTCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTC 887322
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||
Sbjct 887323 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 887382
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGT 225721
||| || ||||| || || | || | |||||| | ||||
Sbjct 887383 CTTACCGGTCAAGGTCTTCACAAAGATCTGCATTGTCTGGT 887423
>seq42717
Length=256
Score = 120 bits (132), Expect = 7e-22
Identities = 131/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| || || ||||| || | ||| || || ||||| | ||||| || ||||||||
Sbjct 174 ACGAAGCCTGAGAACAAGATGTAAAGTCGACTCCTTTTGAATGTTGTAGTCAGCCAAAGT 115
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || || || || ||||||||||| | || || || || || || ||
Sbjct 114 CCGGCCATCTTCAAGTTGTTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGGATGCC 55
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCAC 225665
||||||||| |||||||| || ||| ||||||||||| ||| | |||||
Sbjct 54 TTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATGGTGTCGGAGCTCTCCAC 1
>seq61295
Length=203
Score = 109 bits (120), Expect = 1e-18
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 225549 AGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
|||||| || ||||| ||||||||||| |||||||| | | || ||||| || |||||
Sbjct 201 AGTTCTGCCGTCTTCAAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAAT 142
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
||| |||||||| |||||||| ||| || || |||||||| ||| | ||||| ||
Sbjct 141 ACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGAGCTCTCCACCTC 82
Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || || ||||| || || | ||| ||
Sbjct 81 CAAAGTAATGGTCTTTCCGGTGAGAGTCTT 52
>seq59367
Length=207
Score = 109 bits (120), Expect = 1e-18
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| || || || || || | ||| || || ||||||| ||||| |||||||||||
Sbjct 153 ACGAAGCCTGAGAACGAGATGTAAAGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAAGT 94
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| || ||||| || || || || |||||||| || | || || || || || |||||
Sbjct 93 TCTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATACC 34
Query 225612 TTCCTTGTCTTGGATCTT 225629
|||||| || ||||||||
Sbjct 33 TTCCTTATCCTGGATCTT 16
>seq40511
Length=266
Score = 107 bits (118), Expect = 5e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || || || || || || || || || || || |||| ||||| || || | |||
Sbjct 207 ACGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGAGT 148
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || || ||||| || ||||| || || | || ||||| || || || ||
Sbjct 147 TCGGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCCGGTGGGATTCC 88
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||| || ||| || || || ||||| ||| ||||||| || |
Sbjct 87 CTCCTTGTCTTGGATTTTGGCCTTGACGTTGTCTATCGTGTCAGAGCTTTCCACCTCGAG 28
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||||||||| || || | ||| ||
Sbjct 27 TGTGATCGTCTTTCCGGTGAGAGTCTT 1
>seq58
Length=4472761
Score = 100 bits (110), Expect = 7e-16
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||| | | ||||| || | | |||
Sbjct 4394504 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTGGAATGTTGTAGTCAG--ACAGT 4394561
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||| |||| | ||||| ||||| ||| | |||| ||| || | || | ||| ||
Sbjct 4394562 GCGTCCAGCTTCCACTTGCTTGCCAGCAAAGCTCAGTCTTTGCTGAGCAGGAGCAATTCC 4394621
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||||||||| ||| | | ||| || || || ||| ||| || || |
Sbjct 4394622 TTCCTTATCCTGGATCTTTGTCTTTATATTTTCTATTGTATCCAAGGGTTCAACCTCGAG 4394681
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || || || || | |||||
Sbjct 4394682 GGTGATAGTTTTCCCAGTAAGGGTTTT 4394708
>seq893
Length=213870
Score = 98.7 bits (108), Expect = 2e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| || || |||||||| ||||| || |||||||| || || |||||||| |||||| |
Sbjct 111934 GAAGATCTGTCCATCAGTGATAGAAATGACATTTGTTGGAATGTAAGCAGACACATCATC 111993
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | || ||||||||||||
Sbjct 111994 AGCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 112042
>seq683
Length=758919
Score = 98.7 bits (108), Expect = 2e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| || || || | | ||| | |||||
Sbjct 117140 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATGTTATAGTCTGAGAGAGTGCGGCCATCC 117199
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || || || || | || ||||| || || || || |||||||||
Sbjct 117200 TCCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 117259
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| || || ||| ||| || ||||| || | || || | ||||| ||
Sbjct 117260 TGGAT-TTTGGCTTTGACATTTTCAATAGTGTCACTGGGCTTGACCTCGAGTGTGATGGT 117318
Query 225681 CTTGCCCGTCAAAGTTTT 225698
||||||||||| |||||
Sbjct 117319 CTTGCCCGTCAGGGTTTT 117336
>seq342
Length=1079620
Score = 95.1 bits (104), Expect = 3e-14
Identities = 116/155 (75%), Gaps = 5/155 (3%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| || || |||||||| || || |||| ||||| | || || ||| | |||||
Sbjct 690131 CAGGACCAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAGTTGGACAGAGTGCGTCCATC 690073
Query 225561 TTCTAGCTGCTTCCCAGCGAAGA--TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
||| ||||| |||||||| |||| || || || ||||| || || || || || |||
Sbjct 690072 TTCCAGCTGTTTCCCAGCAAAGAGCTACCTC--TGCTGGTCAGGGGGGATGCCCTCTTTG 690015
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653
|||||||| || ||| ||| |||||||||||
Sbjct 690014 TCTTGGATTTTGGCCTTGACATTCTCGATGGTGTC 689980
>seq154
Length=3754400
Score = 91.5 bits (100), Expect = 4e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || |||||||| ||||| || || ||||| || || |||||||| ||||||||
Sbjct 2717304 AATACCTGTCCATCAGTGATAGAAATGACGTTTGTTGGAATGTAAGCAGACACATCACCA 2717363
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | || |||||||| |||
Sbjct 2717364 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCGAAA 2717411
>seq436
Length=3484179
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
|||||| || | | || ||||| || | |||||| || || |||||||| ||||||||
Sbjct 654218 GAATATCTGTCTACCAAGCATAGAAATGATATTTGTTGGAATGTAAGCAGACACATCACC 654159
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | ||| ||||||||||||
Sbjct 654158 AGCTTGTGTTTCTATGACTGGTAAAGCAGTCAATGAGCCACCACCAAAA 654110
>seq328
Length=1042635
Score = 89.7 bits (98), Expect = 1e-12
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 7579 CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAAT 7638
||||| ||||| ||||| |||||| | || || || |||| || || || || || ||
Sbjct 388257 CATGCATTTGTAATGATCTTCTTTATAGTAATACCAATTATAATCGGAGGCTTTGGCAAC 388316
Query 7639 TGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATA 7698
||| | || ||| |||| ||||||||||| || | || ||||| | | ||||| |||
Sbjct 388317 TGACTGGTCCCTCTAATAATTGGTGCTCCGGACGTAGCATTTCCCCGTATAAACAACATA 388376
Query 7699 AGTTTTTGATTACTACCGCCTTCCTTATT 7727
|| || ||| | |||| || ||||| ||
Sbjct 388377 AGCTTCTGACTCTTACCCCCCTCCTTCTT 388405
>seq55541
Length=216
Score = 87.8 bits (96), Expect = 4e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || || || || || || || || || || ||||| | ||||| || || | |||
Sbjct 157 ACGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTTTGTATGTTGTAGTCAGCGAGAGT 98
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || || ||||| || || ||||| | | |||||||| || ||||| ||
Sbjct 97 TCGGCCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGTTGGTCCGGAGGAATTCC 38
Query 225612 TTCCTTGTCTTGGATCTT 225629
|||||||||||||||||
Sbjct 37 CTCCTTGTCTTGGATCTT 20
>seq377
Length=1226547
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/124 (76%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 225512 GGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCT 225571
|||||||||| ||| |||| | |||||| || | | | | | ||||| || ||||| |
Sbjct 791706 GGAGAGTGGACTCTCTTTGCATATTGTAGTCTGAGAGAATGCGACCATCCTCCAGCTGTT 791647
Query 225572 TCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTT 225631
| || || || | || | ||| ||||| || ||||| ||||||||||||||||| |||
Sbjct 791646 TGCCTGCAAAAACCAGACATTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGAT-TTTA 791588
Query 225632 GCTT 225635
||||
Sbjct 791587 GCTT 791584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191561896106666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |