Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq21504 210 5e-49
seq29432 206 6e-48
seq10281 194 4e-44
seq40511 165 2e-35
seq19370 165 2e-35
seq25626 158 3e-33
seq19201 152 1e-31
seq475 150 4e-31
seq42717 149 2e-30
seq48301 145 2e-29
seq61295 138 3e-27
seq273 136 1e-26
seq671 129 1e-24
seq69 125 2e-23
seq58060 123 6e-23
seq58 123 6e-23
seq419 120 7e-22
seq59367 111 4e-19
seq142 111 4e-19
seq73 104 6e-17
seq55541 102 2e-16
seq652 98.7 2e-15
seq342 98.7 2e-15
seq431 93.3 1e-13
seq17446 91.5 4e-13
>seq21504
Length=484
Score = 210 bits (232), Expect = 5e-49
Identities = 176/216 (81%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| ||||| |||||||||||||||||||| ||||| |||
Sbjct 18 CAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACCCTCGAGGTGGAGAGCTCCGAC 77
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| ||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 78 ACTATCGACAACGTGAAAACCAAGATACAGGACAAGGAAGGCATCCCACCGGACCAGCAA 137
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||||||||| || |||||||||||| | |||||||| || || ||| ||
Sbjct 138 AGGTTAATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACTCTTGCTGACTACAACATC 197
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| ||||| |||||||| || | || ||| | |||
Sbjct 198 CAGAAAGAGTCAACACTTCACTTGGTCTTGCGTCTC 233
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || ||||| || || ||||||||||| ||||| ||||| |||
Sbjct 246 CAAATCTTCGTCAAGACCCTTACAGGCAAGACTATCACCCTCGAAGTGGAGAGCTCTGAC 305
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| || ||||||||||| || || ||||| |||||||||||
Sbjct 306 ACCATTGATAACGTGAAAGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGACCAGCAG 365
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | ||| | ||||| || ||| ||
Sbjct 366 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTTTGGCCGACTACAACATC 425
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || ||||| || || || ||||
Sbjct 426 CAGAAGGAATCGACCCTTCA-CTTG 449
>seq29432
Length=351
Score = 206 bits (228), Expect = 6e-48
Identities = 177/219 (81%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || |||||||||||||| || ||| |||
Sbjct 335 CAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGAC 276
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct 275 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAGCAG 216
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| ||||||||||||||||| || | ||| | || || || ||| ||
Sbjct 215 CGATTGATCTTCGCTGGAAAACAGCTCGAAGACGGGCGTACTTTGGCTGACTACAACATC 156
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || |||||||| ||||| ||||||
Sbjct 155 CAGAAAGAATCCACGCTTCATCTTGTGTTGAGGCTCAGA 117
>seq10281
Length=966
Score = 194 bits (214), Expect = 4e-44
Identities = 163/199 (82%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||| | || |||||||| ||||| || ||||||||||||||||||||||| |||||||||
Sbjct 44 TTCATTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCTGACACCATC 103
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| ||||| ||| ||||| ||||| || ||||| ||||| ||||||||||| | |||
Sbjct 104 GACAACGTTAAAGTCAAGATCCAGGATAAGGAAGGCATCCCGCCGGACCAGCAGAGGCTT 163
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| |||||||||||||| || | ||| | ||||| || ||| |||| |||
Sbjct 164 ATCTTCGCCGGCAAACAGCTCGAAGACGGCCGAACTTTGGCCGACTACAACATCCAGAAA 223
Query 178110 GAATCAACACTGCATCTTG 178128
|| || || || || ||||
Sbjct 224 GAGTCCACGCTCCA-CTTG 241
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| || || || || ||||||||||||||||| || ||||| |||
Sbjct 266 CAGATCTTCGTCAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCTCCGAC 325
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||| |||| |||||||| || ||||| || || || || || || ||||||||||||
Sbjct 326 ACCGTCGACAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATACCACCGGACCAGCAA 385
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| |||||||| |||||||| ||||| |||||||||| || || ||| ||
Sbjct 386 AGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGGACTCTTGCTGACTACAACATC 445
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||||| ||
Sbjct 446 CAGAAGGAGTCGACACTTCATCTCGT 471
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| | || || || ||||| || | |||||||| ||||| ||
Sbjct 494 CAAATCTTTGTTAAAACCTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCTGAT 553
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| ||| || || || ||||||||||| ||||| ||||| |||||
Sbjct 554 ACCATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATCCCACCGGATCAGCAG 613
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| ||||||||||| || ||||| | || || || ||| ||
Sbjct 614 AGATTGATCTTTGCAGGAAAGCAGCTCGAAGACGGCCGGACTTTGGCTGACTACAACATC 673
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 674 CAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTC 709
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || ||||| || ||||| || || || ||
Sbjct 722 CAGATCTTCGTCAAGACCCTTACGGGGAAGACCATCACTCTGGAGGTCGAGAGTTCTGAT 781
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || || || ||||||||||| ||||| |||||||||||
Sbjct 782 ACTATCGACAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCGGACCAGCAG 841
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||| ||||| || ||||| | || | || || || ||| ||
Sbjct 842 CGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAACATC 901
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||||| || || || || |||| ||
Sbjct 902 CAGAAAGAGTCGACCCTCCA-CTTGGTT 928
>seq40511
Length=266
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995
|| |||||||| ||||| |||||||| ||||||||||||||||| ||||| || || |||
Sbjct 1 AAGACTCTCACCGGAAAGACGATCACACTCGAGGTGGAAAGCTCTGACACGATAGACAAC 60
Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055
||||| || || || ||||| || |||||||| ||||||||||| | || || |||
Sbjct 61 GTCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCGGACCAGCAGAGGCTGATTTTC 120
Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115
|||||||| || ||||| || || | ||||| || || || ||| |||| || || ||
Sbjct 121 GCCGGAAAGCAACTCGAGGACGGCCGAACTCTCGCTGACTACAACATCCAGAAGGAGTCG 180
Query 178116 ACACTGCATCTTGTTTTGAGACTC 178139
|| || ||||| ||| | || |||
Sbjct 181 ACCCTTCATCTCGTTCTCAGGCTC 204
>seq19370
Length=533
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995
||||| || || || || || ||||| |||||||| || ||| ||||||||||| ||
Sbjct 1 AAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGCAGCGACACCATCGACAAT 60
Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055
||||| || ||||| ||||| ||||| ||||||||||| ||||| | | ||||||
Sbjct 61 GTCAAGGCCAAAATTCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGAGGTTGATCTTC 120
Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115
||||||||||||||||| ||||| | || | ||||| || || | |||||||||||
Sbjct 121 GCCGGAAAACAGCTCGAGGATGGCCGTACCTTGGCCGACTACAATATTCAAAAAGAATCT 180
Query 178116 ACACTGCATCTTGTTTTGAGACTCAG 178141
|||||||| ||||| |||| || ||
Sbjct 181 ACACTGCACCTTGTGCTGAGGCTTAG 206
>seq25626
Length=405
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| |||||||| ||||| || || || | ||||| || |||||||||
Sbjct 133 CAGATCTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAGGTTGAGAGCTCAGAC 192
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||||||||| || || || ||||||||||||||
Sbjct 193 ACCATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 252
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| ||||| || | || | ||||| || ||| |
Sbjct 253 AGATTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTACAACATT 312
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || || || | ||||||||| | || ||
Sbjct 313 CAGAAGGAGTCGACTTTACATCTTGTTCTCAGGCT 347
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 178020 GAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079
||||| || |||||||||||||| || | |||||||||||||| ||||| ||||| ||
Sbjct 1 GAAGGTATTCCTCCGGACCAGCAGAGATTGATCTTCGCCGGAAAGCAGCTTGAAGACGGC 60
Query 178080 AGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || | || || || ||| |||||||||| || || | ||||||||| | || ||
Sbjct 61 AGAACATTGGCTGACTACAACATCCAAAAAGAGTCGACTTTACATCTTGTTCTCAGGCT 119
>seq19201
Length=536
Score = 152 bits (168), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || |||||||| || || || || ||||| ||||| ||||| |||
Sbjct 508 AAAATGC---AGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAA 452
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| ||||| || || || ||||| |||||||| ||||||||||| |||
Sbjct 451 TCGTCCGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCACCG 392
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || || || ||||| || || ||||| ||||| |||||||| || || |||
Sbjct 391 GATCAGCAGCGGCTGATATTCGCGGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGAT 332
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||| |||| || || || || || || |||| ||
Sbjct 331 TACAACATCCAGAAGGAGTCGACGCTTCA-CTTGGTT 296
>seq475
Length=1570329
Score = 150 bits (166), Expect = 4e-31
Identities = 168/222 (76%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| ||||||||||||| || || || || || || |||||||| ||||
Sbjct 1255872 AGGTCAAAATGC---AAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGG 1255928
Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
||| ||| || |||||||| ||||| || || ||||| ||||| || || || ||
Sbjct 1255929 TGG--AGCCCAGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 1255986
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 1255987 CCCCCCTGACCAGCAGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACTCT 1256046
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| | || || ||| |||| ||||| || || ||||| || ||
Sbjct 1256047 TTCTGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 1256088
>seq42717
Length=256
Score = 149 bits (164), Expect = 2e-30
Identities = 135/170 (79%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 177969 GTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATC 178028
||||| ||||| ||||||||||| || || ||| ||||| |||||||| ||||| |||
Sbjct 1 GTGGAGAGCTCCGACACCATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGCATC 60
Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088
|||||||| ||||| | |||||||||||||||||||| || |||||||| ||||| |
Sbjct 61 CCTCCGGATCAGCAGAGGCTTATCTTCGCCGGAAAACAACTTGAAGATGGCCGGACTTTG 120
Query 178089 GCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || ||| | ||||| || || || | ||||||||| | || ||
Sbjct 121 GCTGACTACAACATTCAAAAGGAGTCGACTTTACATCTTGTTCTCAGGCT 170
>seq48301
Length=236
Score = 145 bits (160), Expect = 2e-29
Identities = 154/202 (76%), Gaps = 1/202 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || | || || || || ||||| || |||||||| ||||| || || ||
Sbjct 1 TTCGTTAAGACATTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTCCGATACTATT 60
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| ||||||||| ||||| |||||||| ||||| || || |||||||||||||| ||
Sbjct 61 GACAACGTCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAGCAACGTCTC 120
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|||||||| ||||| |||||||| ||||| | || | || || || ||| |||| ||
Sbjct 121 ATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTGGCTGACTACAACATCCAGAAG 180
Query 178110 GAATCAACACTGCATCTTGTTT 178131
|| || || || || |||| ||
Sbjct 181 GAGTCGACCCTTCA-CTTGGTT 201
>seq61295
Length=203
Score = 138 bits (152), Expect = 3e-27
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| |||||||| ||||| || || || | |||||||| ||||| |||
Sbjct 40 CAGATCTTTGTGAAGACTCTCACCGGAAAGACCATTACTTTGGAGGTGGAGAGCTCCGAC 99
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || ||||||||||||||
Sbjct 100 ACCATTGATAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 159
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
| | ||||||||||| || ||||| ||||| || || |||||
Sbjct 160 AGGTTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCAGAACTCT 203
>seq273
Length=4066651
Score = 136 bits (150), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| |||||||| || |||
Sbjct 887412 CAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 887355
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| || |||||||| || ||||| || |||||||
Sbjct 887354 ACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAGC 887295
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||| | ||||| ||| | || || |||| || |||
Sbjct 887294 AGAGGTTGATCTTTGCCGGCAAACAGTTGGAAGACGGACGCACCCTGTCCGACTACAACA 887235
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || ||||| || ||
Sbjct 887234 TCCAGAAAGAGTCCACTCTGCACCTGGT 887207
>seq671
Length=818080
Score = 129 bits (142), Expect = 1e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987
||||||||||||| || || || || || |||||||| ||||| ||| ||| | || |
Sbjct 168423 TTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTTGAGGTTGAACCCTCGGGTACAA 168482
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
| || || | || |||| ||||| || |||||||| ||||| | |||||| |||
Sbjct 168483 TAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGCTCAGCAAAGAC 168542
Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107
| ||||| || || || ||||| |||||| || | ||| | | || || ||| | ||||
Sbjct 168543 TGATCTTTGCTGGCAAGCAGCTGGAAGATTGATGTACTTTGTCTGACTACAACATTCAAA 168602
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| || || || || ||||| || ||||||||
Sbjct 168603 AGGAGTCCACTCTTCATCTGGTGTTGAGACT 168633
>seq69
Length=3989787
Score = 125 bits (138), Expect = 2e-23
Identities = 158/216 (73%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||||||||| || || || || |||||||| ||||| ||| ||| ||
Sbjct 665290 CAGATTTTCGTGAAAACTCTTACTGGGAAGACCATCACCCTTGAGGTTGAACCCTCGGAT 665349
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC-A 178042
|| || || || || || |||| ||||| ||||||||||| |||| || |||| |
Sbjct 665350 ACAATAGAAAATGTAAAGGCCCAGATCCAGGATAAAGAAGGAATTTCTCCTGATCAGCAA 665409
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
| |||| ||||| || || || || || |||| |||| | ||| | | | || | | |
Sbjct 665410 AAGACTGATCTTTGCTGGCAAGCAACTGGAAGCTGGACGCACTGTGTCTGGCTACAGCAT 665469
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| ||| || || || || |||||||| |||| |||
Sbjct 665470 TCCAAAGGAGTCCACCCTTCATCTTGTGTTGACACT 665505
>seq58060
Length=210
Score = 123 bits (136), Expect = 6e-23
Identities = 135/178 (76%), Gaps = 1/178 (1%)
Strand=Plus/Plus
Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013
|| |||||| | || ||||| ||||| |||||||| || ||||| || ||||| |||
Sbjct 1 ACTATCACCTTGGAAGTGGAGAGCTCCGACACCATTGATAACGTTAAGGCTAAGATCCAG 60
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| ||||| ||||| ||||||||||| || || |||||||| || || ||||| ||
Sbjct 61 GACAAGGAAGGCATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAG 120
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || | ||| | || || || ||| | || ||||| || || || || |||| ||
Sbjct 121 GACGGTCGCACTTTGGCTGACTACAACATTCAGAAAGAGTCGACCCTTCA-CTTGGTT 177
>seq58
Length=4472761
Score = 123 bits (136), Expect = 6e-23
Identities = 157/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| || || || ||||| |||||||||||||| ||| || ||
Sbjct 4394720 CAGATTTTTGTGAAAACCCTTACTGGGAAAACTATCACCCTCGAGGTTGAACCCTTGGAT 4394661
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || | || |||||| ||||| || |||||||| |||| | ||||||
Sbjct 4394660 ACAATAGAAAATATAAAGACAAAGATCCAGGATAAGGAAGGAATTGCTCCTGCTCAGCAA 4394601
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| | ||| || || || || | |||| |||| | ||| | | || || ||| |
Sbjct 4394600 AGACTGAGCTTTGCTGGCAAGCAAGTGGAAGCTGGACGCACTGT--CTGACTACAACATT 4394543
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| ||| || || || || |||||||| ||||||||
Sbjct 4394542 CCAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 4394508
>seq419
Length=824084
Score = 120 bits (132), Expect = 7e-22
Identities = 155/213 (73%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987
||||||||||||| || || || || || |||||||||||||| ||| ||| || || |
Sbjct 83534 TTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGATACAA 83593
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
|| || || || ||||| ||||| || |||| ||| ||||| || | | | |||
Sbjct 83594 CAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGAAATTCCTCCTGATCTGTACAGAC 83653
Query 178048 TTATCTTCGCCGGAAAACAGCTCG-AAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
| ||||| || || || || || | |||||||| ||| | | || || ||| | |||
Sbjct 83654 TGATCTTTGCTGGCAAGCAACTGGAAAGATGGACACACTGTGTCTGACTACAACATTCAA 83713
Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || ||||||| |||||||||
Sbjct 83714 AAGGAGTCCACTCTTTATCTTGTGTTGAGACTC 83746
>seq59367
Length=207
Score = 111 bits (122), Expect = 4e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| ||||| ||| ||||| ||||| || ||||| ||||| ||||| ||||| | ||
Sbjct 1 GACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATCCCACCGGATCAGCAGAGGCTC 60
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||||||||| || ||||| || || ||| | ||||| || ||| |||||||
Sbjct 61 ATCTTCGCCGGAAAACAACTTGAAGACGGCAGAACTTTGGCCGACTACAACATCCAAAAG 120
Query 178110 GAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || | ||||| ||| | || ||
Sbjct 121 GAGTCGACTTTACATCTCGTTCTCAGGCT 149
>seq142
Length=3748655
Score = 111 bits (122), Expect = 4e-19
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || | ||| | ||||| || ||||| ||| || ||
Sbjct 2342964 CAGATTTTCGTGAAAACCCTTACTTGGAAATCCATCACTCTTGAGGTTGAACCCTTGGAT 2343023
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || |||| ||||| ||||||||||| ||||| || | |||
Sbjct 2343024 ACAATAGAAAATGTAAAGACCAAGACCCAGGATAAAGAAGGAATTCCTCCTGATTAACAA 2343083
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| | ||| || || || | ||||||| || | ||| | | || || ||| |
Sbjct 2343084 AGACTGAGCTTTGCTGGCAAGAA--ACGAAGATAGACGTACTTTGTCTGACTACAACATT 2343141
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 2343142 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 2343176
>seq73
Length=6645612
Score = 104 bits (114), Expect = 6e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||| ||| |||||| || || ||||| || || |||||||| ||| || ||
Sbjct 5748264 CAGATTTTCATGAGAACTCTTACTGGGAAAACTATTACTCTCGAGGTTGAACCCTTGGAT 5748323
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| | || || || || ||||| ||||| ||||||||||| ||||| | ||||||
Sbjct 5748324 ACAGTGGACAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGTTCAGCAA 5748383
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| | ||| | || || || || |||| |||| | ||| | | | | ||| |
Sbjct 5748384 AGACTAAGCTTTTCTGGCAAGCAACTGGAAGCTGGACGCACTTTGTCTAACTGCAACATT 5748443
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
| ||| || || || || |||||||| |||
Sbjct 5748444 CCAAAGGAGTCCACTCTTCATCTTGTGTTG 5748473
>seq55541
Length=216
Score = 102 bits (112), Expect = 2e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| ||||||||| ||||| || ||||| || ||||| ||||||||||| || |
Sbjct 1 CATCGACAACGTCAAAGCTAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAACAGAG 60
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
| ||||| |||||||| || || || || || | ||||| || || || ||| | ||
Sbjct 61 GTTGATCTTTGCCGGAAAGCAACTTGAGGACGGCCGAACTCTCGCTGACTACAACATACA 120
Query 178106 AAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||| || || || || ||||| ||| | || |||
Sbjct 121 AAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTC 154
>seq652
Length=450682
Score = 98.7 bits (108), Expect = 2e-15
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || | || ||||| || ||||| ||| || |
Sbjct 80762 CAGATTTTCGTGAAAACCCTTACTGGGCAGACCATCACTCTGGAGGTTGAACCCTTGGCT 80821
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| ||||| ||||||||||| ||||| | ||||||
Sbjct 80822 ACAATAGAAAATGTAAAGGCCAAGATCCAGGAGAAAGAAGGAATTCCTCCTGCTCAGCAA 80881
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085
|||| | ||| || || || ||||| |||| |||| | |||
Sbjct 80882 AGACTGAGCTTTGCTGGCAAGCAGCTGGAAGGTGGACGTACT 80923
>seq342
Length=1079620
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/145 (76%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||||||||| ||||| || || || |||||||| || ||||| || ||||||
Sbjct 689980 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 690039
Query 178041 CAACGACTTA--TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATA 178098
|| || || |||| || || |||||||| ||||||||| | ||||| || | || |
Sbjct 690040 CA--GAGGTAGCTCTTTGCTGGGAAACAGCTGGAAGATGGACGCACTCTGTCCAACTACA 690097
Query 178099 ACGTCCAAAAAGAATCAACACTGCA 178123
|| |||| || || || || |||||
Sbjct 690098 ACATCCAGAAGGAGTCCACTCTGCA 690122
>seq431
Length=5665728
Score = 93.3 bits (102), Expect = 1e-13
Identities = 145/204 (71%), Gaps = 5/204 (2%)
Strand=Plus/Plus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACA 177984
|| || ||||| || || || || || || ||||| |||||||||| ||| || ||||
Sbjct 1742575 ATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTCGAGGTGG--AGCCCAGTGACA 1742632
Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044
| | ||||| |||||| || | || || || || || ||||| || |||||||| |
Sbjct 1742633 CTACTGAGAAAGTCAAAGCTAAAACCCAAGATAAGGAGGGCATCCCACCTGACCAGCAGC 1742692
Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104
| | | || ||||| |||||||| || | || | ||||| | || || || |||
Sbjct 1742693 GTCGGACTTTTGCCGGCAAACAGCTGGAGGTTGTCTGCACTCTCTCAGACTAAAATGTCG 1742752
Query 178105 AAAAAGAATCAACACTGCATCTTG 178128
| ||||| || || ||||| ||||
Sbjct 1742753 AGAAAGAGTCCACTCTGCA-CTTG 1742775
>seq17446
Length=585
Score = 91.5 bits (100), Expect = 4e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|| || |||||||||||||| || || || || || || | || || || ||||||||
Sbjct 6 AAAATCCAGGACAAAGAAGGTATACCACCAGATCAACAGAGGCTGATATTTGCCGGAAAG 65
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| || |||||||| | || || || ||||| ||| | || ||||| || || || ||
Sbjct 66 CAACTGGAAGATGGCCGAACCCTAGCGGATTACAACATTCAGAAAGAGTCTACTCTTCAC 125
Query 178125 CTTGTTTTGAGACTCAGA 178142
|| || ||||| ||||||
Sbjct 126 CTCGTCTTGAGGCTCAGA 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202752792610166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |