Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq21504 210 5e-49 seq29432 206 6e-48 seq10281 194 4e-44 seq40511 165 2e-35 seq19370 165 2e-35 seq25626 158 3e-33 seq19201 152 1e-31 seq475 150 4e-31 seq42717 149 2e-30 seq48301 145 2e-29 seq61295 138 3e-27 seq273 136 1e-26 seq671 129 1e-24 seq69 125 2e-23 seq58060 123 6e-23 seq58 123 6e-23 seq419 120 7e-22 seq59367 111 4e-19 seq142 111 4e-19 seq73 104 6e-17 seq55541 102 2e-16 seq652 98.7 2e-15 seq342 98.7 2e-15 seq431 93.3 1e-13 seq17446 91.5 4e-13 >seq21504 Length=484 Score = 210 bits (232), Expect = 5e-49 Identities = 176/216 (81%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct 18 CAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACCCTCGAGGTGGAGAGCTCCGAC 77 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| ||||| |||||||| ||||| ||||| |||||||||||| Sbjct 78 ACTATCGACAACGTGAAAACCAAGATACAGGACAAGGAAGGCATCCCACCGGACCAGCAA 137 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||||||||| || |||||||||||| | |||||||| || || ||| || Sbjct 138 AGGTTAATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACTCTTGCTGACTACAACATC 197 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| |||||||| || | || ||| | ||| Sbjct 198 CAGAAAGAGTCAACACTTCACTTGGTCTTGCGTCTC 233 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || ||||| || || ||||||||||| ||||| ||||| ||| Sbjct 246 CAAATCTTCGTCAAGACCCTTACAGGCAAGACTATCACCCTCGAAGTGGAGAGCTCTGAC 305 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| || ||||||||||| || || ||||| ||||||||||| Sbjct 306 ACCATTGATAACGTGAAAGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGACCAGCAG 365 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | ||| | ||||| || ||| || Sbjct 366 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTTTGGCCGACTACAACATC 425 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 426 CAGAAGGAATCGACCCTTCA-CTTG 449 >seq29432 Length=351 Score = 206 bits (228), Expect = 6e-48 Identities = 177/219 (81%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || |||||||||||||| || ||| ||| Sbjct 335 CAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGAC 276 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || ||||||||||||||||||||||| ||||| Sbjct 275 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAGCAG 216 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| ||||||||||||||||| || | ||| | || || || ||| || Sbjct 215 CGATTGATCTTCGCTGGAAAACAGCTCGAAGACGGGCGTACTTTGGCTGACTACAACATC 156 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || |||||||| ||||| |||||| Sbjct 155 CAGAAAGAATCCACGCTTCATCTTGTGTTGAGGCTCAGA 117 >seq10281 Length=966 Score = 194 bits (214), Expect = 4e-44 Identities = 163/199 (82%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||| | || |||||||| ||||| || ||||||||||||||||||||||| ||||||||| Sbjct 44 TTCATTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCTGACACCATC 103 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || ||||| ||| ||||| ||||| || ||||| ||||| ||||||||||| | ||| Sbjct 104 GACAACGTTAAAGTCAAGATCCAGGATAAGGAAGGCATCCCGCCGGACCAGCAGAGGCTT 163 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||| |||||||||||||| || | ||| | ||||| || ||| |||| ||| Sbjct 164 ATCTTCGCCGGCAAACAGCTCGAAGACGGCCGAACTTTGGCCGACTACAACATCCAGAAA 223 Query 178110 GAATCAACACTGCATCTTG 178128 || || || || || |||| Sbjct 224 GAGTCCACGCTCCA-CTTG 241 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || ||||||||||||||||| || ||||| ||| Sbjct 266 CAGATCTTCGTCAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCTCCGAC 325 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||| |||| |||||||| || ||||| || || || || || || |||||||||||| Sbjct 326 ACCGTCGACAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATACCACCGGACCAGCAA 385 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||| |||||||| ||||| |||||||||| || || ||| || Sbjct 386 AGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGGACTCTTGCTGACTACAACATC 445 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| ||||| || Sbjct 446 CAGAAGGAGTCGACACTTCATCTCGT 471 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | || || || ||||| || | |||||||| ||||| || Sbjct 494 CAAATCTTTGTTAAAACCTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCTGAT 553 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| || || || ||||||||||| ||||| ||||| ||||| Sbjct 554 ACCATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATCCCACCGGATCAGCAG 613 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| ||||||||||| || ||||| | || || || ||| || Sbjct 614 AGATTGATCTTTGCAGGAAAGCAGCTCGAAGACGGCCGGACTTTGGCTGACTACAACATC 673 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 674 CAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTC 709 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| || ||||| || || || || Sbjct 722 CAGATCTTCGTCAAGACCCTTACGGGGAAGACCATCACTCTGGAGGTCGAGAGTTCTGAT 781 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| || || || ||||||||||| ||||| ||||||||||| Sbjct 782 ACTATCGACAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCGGACCAGCAG 841 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||||| || ||||| | || | || || || ||| || Sbjct 842 CGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAACATC 901 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||||| || || || || |||| || Sbjct 902 CAGAAAGAGTCGACCCTCCA-CTTGGTT 928 >seq40511 Length=266 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 || |||||||| ||||| |||||||| ||||||||||||||||| ||||| || || ||| Sbjct 1 AAGACTCTCACCGGAAAGACGATCACACTCGAGGTGGAAAGCTCTGACACGATAGACAAC 60 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 ||||| || || || ||||| || |||||||| ||||||||||| | || || ||| Sbjct 61 GTCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCGGACCAGCAGAGGCTGATTTTC 120 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 |||||||| || ||||| || || | ||||| || || || ||| |||| || || || Sbjct 121 GCCGGAAAGCAACTCGAGGACGGCCGAACTCTCGCTGACTACAACATCCAGAAGGAGTCG 180 Query 178116 ACACTGCATCTTGTTTTGAGACTC 178139 || || ||||| ||| | || ||| Sbjct 181 ACCCTTCATCTCGTTCTCAGGCTC 204 >seq19370 Length=533 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 ||||| || || || || || ||||| |||||||| || ||| ||||||||||| || Sbjct 1 AAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGCAGCGACACCATCGACAAT 60 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 ||||| || ||||| ||||| ||||| ||||||||||| ||||| | | |||||| Sbjct 61 GTCAAGGCCAAAATTCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGAGGTTGATCTTC 120 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 ||||||||||||||||| ||||| | || | ||||| || || | ||||||||||| Sbjct 121 GCCGGAAAACAGCTCGAGGATGGCCGTACCTTGGCCGACTACAATATTCAAAAAGAATCT 180 Query 178116 ACACTGCATCTTGTTTTGAGACTCAG 178141 |||||||| ||||| |||| || || Sbjct 181 ACACTGCACCTTGTGCTGAGGCTTAG 206 >seq25626 Length=405 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| |||||||| ||||| || || || | ||||| || ||||||||| Sbjct 133 CAGATCTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAGGTTGAGAGCTCAGAC 192 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || || |||||||||||||| Sbjct 193 ACCATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 252 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| ||||| || | || | ||||| || ||| | Sbjct 253 AGATTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTACAACATT 312 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || | ||||||||| | || || Sbjct 313 CAGAAGGAGTCGACTTTACATCTTGTTCTCAGGCT 347 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 178020 GAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079 ||||| || |||||||||||||| || | |||||||||||||| ||||| ||||| || Sbjct 1 GAAGGTATTCCTCCGGACCAGCAGAGATTGATCTTCGCCGGAAAGCAGCTTGAAGACGGC 60 Query 178080 AGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | || || || ||| |||||||||| || || | ||||||||| | || || Sbjct 61 AGAACATTGGCTGACTACAACATCCAAAAAGAGTCGACTTTACATCTTGTTCTCAGGCT 119 >seq19201 Length=536 Score = 152 bits (168), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| || || || || ||||| ||||| ||||| ||| Sbjct 508 AAAATGC---AGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAA 452 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| ||||| || || || ||||| |||||||| ||||||||||| ||| Sbjct 451 TCGTCCGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCACCG 392 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || || ||||| || || ||||| ||||| |||||||| || || ||| Sbjct 391 GATCAGCAGCGGCTGATATTCGCGGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGAT 332 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||| |||| || || || || || || |||| || Sbjct 331 TACAACATCCAGAAGGAGTCGACGCTTCA-CTTGGTT 296 >seq475 Length=1570329 Score = 150 bits (166), Expect = 4e-31 Identities = 168/222 (76%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| ||||||||||||| || || || || || || |||||||| |||| Sbjct 1255872 AGGTCAAAATGC---AAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGG 1255928 Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 ||| ||| || |||||||| ||||| || || ||||| ||||| || || || || Sbjct 1255929 TGG--AGCCCAGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 1255986 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 ||| || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 1255987 CCCCCCTGACCAGCAGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACTCT 1256046 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | | || || ||| |||| ||||| || || ||||| || || Sbjct 1256047 TTCTGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 1256088 >seq42717 Length=256 Score = 149 bits (164), Expect = 2e-30 Identities = 135/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 177969 GTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATC 178028 ||||| ||||| ||||||||||| || || ||| ||||| |||||||| ||||| ||| Sbjct 1 GTGGAGAGCTCCGACACCATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGCATC 60 Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088 |||||||| ||||| | |||||||||||||||||||| || |||||||| ||||| | Sbjct 61 CCTCCGGATCAGCAGAGGCTTATCTTCGCCGGAAAACAACTTGAAGATGGCCGGACTTTG 120 Query 178089 GCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || ||| | ||||| || || || | ||||||||| | || || Sbjct 121 GCTGACTACAACATTCAAAAGGAGTCGACTTTACATCTTGTTCTCAGGCT 170 >seq48301 Length=236 Score = 145 bits (160), Expect = 2e-29 Identities = 154/202 (76%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || | || || || || ||||| || |||||||| ||||| || || || Sbjct 1 TTCGTTAAGACATTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTCCGATACTATT 60 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || ||||||||| ||||| |||||||| ||||| || || |||||||||||||| || Sbjct 61 GACAACGTCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAGCAACGTCTC 120 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| ||||| |||||||| ||||| | || | || || || ||| |||| || Sbjct 121 ATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTGGCTGACTACAACATCCAGAAG 180 Query 178110 GAATCAACACTGCATCTTGTTT 178131 || || || || || |||| || Sbjct 181 GAGTCGACCCTTCA-CTTGGTT 201 >seq61295 Length=203 Score = 138 bits (152), Expect = 3e-27 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| |||||||| ||||| || || || | |||||||| ||||| ||| Sbjct 40 CAGATCTTTGTGAAGACTCTCACCGGAAAGACCATTACTTTGGAGGTGGAGAGCTCCGAC 99 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || |||||||||||||| Sbjct 100 ACCATTGATAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 159 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 | | ||||||||||| || ||||| ||||| || || ||||| Sbjct 160 AGGTTGATCTTCGCCGGGAAGCAGCTTGAAGACGGCAGAACTCT 203 >seq273 Length=4066651 Score = 136 bits (150), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| |||||||| || ||| Sbjct 887412 CAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 887355 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| || |||||||| || ||||| || ||||||| Sbjct 887354 ACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAGC 887295 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||| | ||||| ||| | || || |||| || ||| Sbjct 887294 AGAGGTTGATCTTTGCCGGCAAACAGTTGGAAGACGGACGCACCCTGTCCGACTACAACA 887235 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || ||||| || || Sbjct 887234 TCCAGAAAGAGTCCACTCTGCACCTGGT 887207 >seq671 Length=818080 Score = 129 bits (142), Expect = 1e-24 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||||||||| || || || || || |||||||| ||||| ||| ||| | || | Sbjct 168423 TTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTTGAGGTTGAACCCTCGGGTACAA 168482 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 | || || | || |||| ||||| || |||||||| ||||| | |||||| ||| Sbjct 168483 TAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGCTCAGCAAAGAC 168542 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| || || || ||||| |||||| || | ||| | | || || ||| | |||| Sbjct 168543 TGATCTTTGCTGGCAAGCAGCTGGAAGATTGATGTACTTTGTCTGACTACAACATTCAAA 168602 Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | || || || || ||||| || |||||||| Sbjct 168603 AGGAGTCCACTCTTCATCTGGTGTTGAGACT 168633 >seq69 Length=3989787 Score = 125 bits (138), Expect = 2e-23 Identities = 158/216 (73%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||| || || || || |||||||| ||||| ||| ||| || Sbjct 665290 CAGATTTTCGTGAAAACTCTTACTGGGAAGACCATCACCCTTGAGGTTGAACCCTCGGAT 665349 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC-A 178042 || || || || || || |||| ||||| ||||||||||| |||| || |||| | Sbjct 665350 ACAATAGAAAATGTAAAGGCCCAGATCCAGGATAAAGAAGGAATTTCTCCTGATCAGCAA 665409 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 | |||| ||||| || || || || || |||| |||| | ||| | | | || | | | Sbjct 665410 AAGACTGATCTTTGCTGGCAAGCAACTGGAAGCTGGACGCACTGTGTCTGGCTACAGCAT 665469 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | ||| || || || || |||||||| |||| ||| Sbjct 665470 TCCAAAGGAGTCCACCCTTCATCTTGTGTTGACACT 665505 >seq58060 Length=210 Score = 123 bits (136), Expect = 6e-23 Identities = 135/178 (76%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013 || |||||| | || ||||| ||||| |||||||| || ||||| || ||||| ||| Sbjct 1 ACTATCACCTTGGAAGTGGAGAGCTCCGACACCATTGATAACGTTAAGGCTAAGATCCAG 60 Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| ||||| ||||||||||| || || |||||||| || || ||||| || Sbjct 61 GACAAGGAAGGCATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAG 120 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || || | ||| | || || || ||| | || ||||| || || || || |||| || Sbjct 121 GACGGTCGCACTTTGGCTGACTACAACATTCAGAAAGAGTCGACCCTTCA-CTTGGTT 177 >seq58 Length=4472761 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| || || || ||||| |||||||||||||| ||| || || Sbjct 4394720 CAGATTTTTGTGAAAACCCTTACTGGGAAAACTATCACCCTCGAGGTTGAACCCTTGGAT 4394661 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || | || |||||| ||||| || |||||||| |||| | |||||| Sbjct 4394660 ACAATAGAAAATATAAAGACAAAGATCCAGGATAAGGAAGGAATTGCTCCTGCTCAGCAA 4394601 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| | ||| || || || || | |||| |||| | ||| | | || || ||| | Sbjct 4394600 AGACTGAGCTTTGCTGGCAAGCAAGTGGAAGCTGGACGCACTGT--CTGACTACAACATT 4394543 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | ||| || || || || |||||||| |||||||| Sbjct 4394542 CCAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 4394508 >seq419 Length=824084 Score = 120 bits (132), Expect = 7e-22 Identities = 155/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||||||||| || || || || || |||||||||||||| ||| ||| || || | Sbjct 83534 TTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGATACAA 83593 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 || || || || ||||| ||||| || |||| ||| ||||| || | | | ||| Sbjct 83594 CAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGAAATTCCTCCTGATCTGTACAGAC 83653 Query 178048 TTATCTTCGCCGGAAAACAGCTCG-AAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||| || || || || || | |||||||| ||| | | || || ||| | ||| Sbjct 83654 TGATCTTTGCTGGCAAGCAACTGGAAAGATGGACACACTGTGTCTGACTACAACATTCAA 83713 Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || ||||||| ||||||||| Sbjct 83714 AAGGAGTCCACTCTTTATCTTGTGTTGAGACTC 83746 >seq59367 Length=207 Score = 111 bits (122), Expect = 4e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || ||||| ||| ||||| ||||| || ||||| ||||| ||||| ||||| | || Sbjct 1 GACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATCCCACCGGATCAGCAGAGGCTC 60 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||||||||| || ||||| || || ||| | ||||| || ||| ||||||| Sbjct 61 ATCTTCGCCGGAAAACAACTTGAAGACGGCAGAACTTTGGCCGACTACAACATCCAAAAG 120 Query 178110 GAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || | ||||| ||| | || || Sbjct 121 GAGTCGACTTTACATCTCGTTCTCAGGCT 149 >seq142 Length=3748655 Score = 111 bits (122), Expect = 4e-19 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || | ||| | ||||| || ||||| ||| || || Sbjct 2342964 CAGATTTTCGTGAAAACCCTTACTTGGAAATCCATCACTCTTGAGGTTGAACCCTTGGAT 2343023 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||| ||||| ||||||||||| ||||| || | ||| Sbjct 2343024 ACAATAGAAAATGTAAAGACCAAGACCCAGGATAAAGAAGGAATTCCTCCTGATTAACAA 2343083 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| | ||| || || || | ||||||| || | ||| | | || || ||| | Sbjct 2343084 AGACTGAGCTTTGCTGGCAAGAA--ACGAAGATAGACGTACTTTGTCTGACTACAACATT 2343141 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 2343142 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 2343176 >seq73 Length=6645612 Score = 104 bits (114), Expect = 6e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| ||| |||||| || || ||||| || || |||||||| ||| || || Sbjct 5748264 CAGATTTTCATGAGAACTCTTACTGGGAAAACTATTACTCTCGAGGTTGAACCCTTGGAT 5748323 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || ||||| ||||| ||||||||||| ||||| | |||||| Sbjct 5748324 ACAGTGGACAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGTTCAGCAA 5748383 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| | ||| | || || || || |||| |||| | ||| | | | | ||| | Sbjct 5748384 AGACTAAGCTTTTCTGGCAAGCAACTGGAAGCTGGACGCACTTTGTCTAACTGCAACATT 5748443 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 | ||| || || || || |||||||| ||| Sbjct 5748444 CCAAAGGAGTCCACTCTTCATCTTGTGTTG 5748473 >seq55541 Length=216 Score = 102 bits (112), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| ||||||||| ||||| || ||||| || ||||| ||||||||||| || | Sbjct 1 CATCGACAACGTCAAAGCTAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAACAGAG 60 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 | ||||| |||||||| || || || || || | ||||| || || || ||| | || Sbjct 61 GTTGATCTTTGCCGGAAAGCAACTTGAGGACGGCCGAACTCTCGCTGACTACAACATACA 120 Query 178106 AAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||| || || || || ||||| ||| | || ||| Sbjct 121 AAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTC 154 >seq652 Length=450682 Score = 98.7 bits (108), Expect = 2e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || | || ||||| || ||||| ||| || | Sbjct 80762 CAGATTTTCGTGAAAACCCTTACTGGGCAGACCATCACTCTGGAGGTTGAACCCTTGGCT 80821 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| ||||||||||| ||||| | |||||| Sbjct 80822 ACAATAGAAAATGTAAAGGCCAAGATCCAGGAGAAAGAAGGAATTCCTCCTGCTCAGCAA 80881 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||| | ||| || || || ||||| |||| |||| | ||| Sbjct 80882 AGACTGAGCTTTGCTGGCAAGCAGCTGGAAGGTGGACGTACT 80923 >seq342 Length=1079620 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/145 (76%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||||||||| ||||| || || || |||||||| || ||||| || |||||| Sbjct 689980 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 690039 Query 178041 CAACGACTTA--TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATA 178098 || || || |||| || || |||||||| ||||||||| | ||||| || | || | Sbjct 690040 CA--GAGGTAGCTCTTTGCTGGGAAACAGCTGGAAGATGGACGCACTCTGTCCAACTACA 690097 Query 178099 ACGTCCAAAAAGAATCAACACTGCA 178123 || |||| || || || || ||||| Sbjct 690098 ACATCCAGAAGGAGTCCACTCTGCA 690122 >seq431 Length=5665728 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/204 (71%), Gaps = 5/204 (2%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACA 177984 || || ||||| || || || || || || ||||| |||||||||| ||| || |||| Sbjct 1742575 ATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTCGAGGTGG--AGCCCAGTGACA 1742632 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 | | ||||| |||||| || | || || || || || ||||| || |||||||| | Sbjct 1742633 CTACTGAGAAAGTCAAAGCTAAAACCCAAGATAAGGAGGGCATCCCACCTGACCAGCAGC 1742692 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 | | | || ||||| |||||||| || | || | ||||| | || || || ||| Sbjct 1742693 GTCGGACTTTTGCCGGCAAACAGCTGGAGGTTGTCTGCACTCTCTCAGACTAAAATGTCG 1742752 Query 178105 AAAAAGAATCAACACTGCATCTTG 178128 | ||||| || || ||||| |||| Sbjct 1742753 AGAAAGAGTCCACTCTGCA-CTTG 1742775 >seq17446 Length=585 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 || || |||||||||||||| || || || || || || | || || || |||||||| Sbjct 6 AAAATCCAGGACAAAGAAGGTATACCACCAGATCAACAGAGGCTGATATTTGCCGGAAAG 65 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || |||||||| | || || || ||||| ||| | || ||||| || || || || Sbjct 66 CAACTGGAAGATGGCCGAACCCTAGCGGATTACAACATTCAGAAAGAGTCTACTCTTCAC 125 Query 178125 CTTGTTTTGAGACTCAGA 178142 || || ||||| |||||| Sbjct 126 CTCGTCTTGAGGCTCAGA 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202752792610166