Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1989 86.0 5e-12 >seq1989 Length=1255173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| |||||||| || || | | || ||||| || || | || ||||| | ||| Sbjct 654267 ATGGCCCTACCTCCGTGCCATGCCCTTTGCCAGTTCTATGTGGTGAATGGTGAGCTGTCC 654326 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||| || | |||||||||||||| || || |||||||| || | Sbjct 654327 TGCCAGCTGTACCAGAGGTCAGCAGATATGGGCCTTGGTGTGCCCTTCAACATCGCCAGC 654386 Query 19092 TATGCACTTCTTACCTACAT 19111 || || || || |||||||| Sbjct 654387 TACGCCCTGCTCACCTACAT 654406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399491876302050