Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1666 183 2e-41
seq213 111 1e-19
>seq1666
Length=2131315
Score = 183 bits (202), Expect = 2e-41
Identities = 164/206 (80%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 26952 ACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAA 27011
|||||||| || || || |||||||| ||| |||| ||||||||||| ||| || ||
Sbjct 96472 ACAATGGGGGTGACACAGGTGCAGCCGACATTCACCAGCATCTTCTCCAGCTGGAAGGAG 96531
Query 27012 TTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAG 27071
|| |||||| | ||| || | | |||| || || |||||||| ||||| || || |||
Sbjct 96532 TTGGGGCAGTGCTGAGGCTGTCTTCGCAGGACCAGGATCTCTTGCTGGATGGGAACGGAG 96591
Query 27072 TTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCT 27131
|||| ||||| |||||| ||||| |||||||||||||| |||| ||| ||||||||
Sbjct 96592 TTCAAGTGGTGGTCTACCTTCCCTTCAGCATTAACACAGTACAAGTGGCGGCACTTTGCC 96651
Query 27132 TCCCAAATCACAGAGGGATATCTATC 27157
||||| ||||||||||||||||| ||
Sbjct 96652 TCCCAGATCACAGAGGGATATCTCTC 96677
>seq213
Length=3162417
Score = 111 bits (122), Expect = 1e-19
Identities = 99/124 (80%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 4167 ATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCTG 4226
||| |||||||| ||||| | |||||| |||||||| |||||| || ||| ||||| ||
Sbjct 3138230 ATAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTTTACTTTTTAACTCTGGTTG 3138171
Query 4227 TTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAG 4286
|| |||||||||| |||||||| | ||| || || | ||||||||||| |||||| |
Sbjct 3138170 CTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTGTGGAGG 3138111
Query 4287 CTCC 4290
|||
Sbjct 3138110 TTCC 3138107
Score = 100 bits (110), Expect = 2e-16
Identities = 78/93 (84%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| |||||| |||||||||||||||||||||||||| | ||||
Sbjct 3147406 AAAACACCTTCACATTAATCATTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 3147347
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047
||||| || |||| |||||||||| ||| |||
Sbjct 3147346 TCTTCCTGGACATCGGAAAGAACACCTGGGTAT 3147314
Score = 96.9 bits (106), Expect = 3e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115
|||||| |||||| | | ||||| |||||||||||| |||||| |||||| || |||||
Sbjct 3140480 AAGTTTATATTTCCCCAAATCAACTTCTGGAAAAAATATGTCACTTTCAAATTCCTGCAT 3140421
Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166
|||||| || ||||| ||| ||| || || ||| | |||| ||||| ||
Sbjct 3140420 GATCCTTGTGACAAATAGTCTAATATGGCCTGGCTTGTTCATGGCTTCCTT 3140370
Score = 93.3 bits (102), Expect = 3e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| |||| |||||||||| | |||||||||| | |||||||| || |||||| ||
Sbjct 3131266 CTTGAGTTTTCTGCTGAGAACTAAATTAATTCTGTCCTTTAAAGGTCGATTCTTCATGGG 3131207
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
||| || ||||| ||||| | ||||||||||| |||||| |||| ||
Sbjct 3131206 AATGGACAACCAGGTCTTCCTGCCCATAATCACCAAATTCCTTTTACCT 3131158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361240237154990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |