Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 91.5 1e-13
>seq1424
Length=2309046
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/220 (70%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 28951 ATAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAA 29010
|||| || ||||||||||| ||| | || || |||| ||||| ||||| ||| |||
Sbjct 23676 ATAG-GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAG 23618
Query 29011 CGGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGC 29070
||||||| || || | | || | ||| || || ||||| ||||| | |
Sbjct 23617 TGGAACCCAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCC 23558
Query 29071 CCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGG 29130
| ||| || || || || |||||||| ||||| || ||||||||| | ||| |
Sbjct 23557 CTCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTT 23498
Query 29131 CCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170
| |||||||| ||||||||||| || || || || ||||
Sbjct 23497 CTGATTACAACATTCAGAAGGAGTCGACCCTGCATCTGGT 23458
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || |||| ||||| ||||| ||| ||| |||||||
Sbjct 22982 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 22923
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| || || ||||| ||||| | || ||| ||
Sbjct 22922 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAG 22863
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || ||||||||||| |||||||| ||||| ||| | ||| | | ||||||||
Sbjct 22862 CAGAGGCTTATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTTTCTGATTACAAC 22803
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||| || || || || || |||| ||||
Sbjct 22802 ATTCAGAAAGAGTCGACCCTGCATCTGGTCCTACG 22768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428323001340950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |