Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 206 3e-48
seq2337 168 8e-37
seq1989 152 6e-32
seq1960 129 7e-25
>seq1013
Length=2538122
Score = 206 bits (228), Expect = 3e-48
Identities = 575/868 (66%), Gaps = 27/868 (3%)
Strand=Plus/Plus
Query 9500 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 9559
|||| || | |||||| | | ||| || | || ||| || ||||| | || |
Sbjct 1776664 TTGGCCTGGTAGGCAATGTGATGGTGCTGCTGATCCTCACAAAATACAGGCGCCTCCGGA 1776723
Query 9560 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 9619
||| | ||||| | || | ||||||||| | || |||||||| ||||| | ||
Sbjct 1776724 TCCTGCCCAACATCTACTTGCTCAACTTGGCAGTCTCCGACTTGCTCTTTCTGTCGACCC 1776783
Query 9620 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 9679
||||||| ||||| |||| | | || | || | ||| |||||| | | |||
Sbjct 1776784 TGCCATTCTGGATTTACTACGTCA-AGTGGAACA--ACTGGGTTTTTGGCCACTGCATGT 1776840
Query 9680 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 9739
| || ||||| || | | || |||| ||||| | || |||| ||||||||
Sbjct 1776841 GCAAGTTGCTCTCCGGCCTCTATTTCATGGGCTTGTACGGGGAGTGTTTTTTCATCATCC 1776900
Query 9740 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 9799
|||| || ||||| |||| || || | ||| |||| || ||| || |||| | |
Sbjct 1776901 TGCTGACCATAGACCGGTACCTGGCCATCGTCCATGCCGTGTGTGCCCTGCGGTTCCGGA 1776960
Query 9800 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTT-GTTGTCC 9858
| || || | ||| || | | | |||| |||||| | ||| |||| | | || |
Sbjct 1776961 CCGTCACTTTTGGGATCCTCAGCAGTGTCCTCACCTGGGTCTTGGTAGGGCTAGCTG-CG 1777019
Query 9859 CTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATC 9916
|||||||| || |||| || ||| || || || | | |||| || | ||
Sbjct 1777020 CTCCCTGAGCTTGTCTTCCAGAAGTCCCAGGAGGATTCTGAGATGTTGTTCTGTA-GTTC 1777078
Query 9917 -CTTACTACCCAGAGATGTCTACAAATGTT--TGGAGGCGCGCCCACGTTGCAAAGGTGA 9973
||| ||||| ||| | | | || |||| || || | || | || |
Sbjct 1777079 ACTT--TACCCGGAG--GGCGAGGAAGACACCTGGAAACGGTTTCAGGCTGTCAGAGTCA 1777134
Query 9974 TTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCA 10033
|||||| ||||| | ||||||||||| ||||||| |||||||| | ||| || |
Sbjct 1777135 ATATGTTTTGTCTCGTGCTGCCTCTGCTCGTTATGGCCGTCTGCTATACCGGAATCATTA 1777194
Query 10034 GAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCA 10093
|| ||| ||| ||||||| |||| |||| ||||||||||| ||||||| |||||||
Sbjct 1777195 AAACGCTGATGAAATGCCCCAGTAAGAGGAAGGACAAGGCCATCCGGCTCATTTTTGTCA 1777254
Query 10094 TCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCT 10153
||||||||| || ||| |||| ||| | ||||||||| | |||||| | | || |
Sbjct 1777255 TCATGGTGGTCTTTTTCCTTTTCTGGGCCCCCTACAACCTGGTTCTCTTTTTCAACACTT 1777314
Query 10154 TTC-ACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTA-----ACTTGGACATGG 10207
||| | ||| |||||| || || || ||||||| | | ||||| |||
Sbjct 1777315 TTCAAAGCA--TCTTCTT----TGAGATGAGCTGTGAGCAGAACAAACAGCTGGACGTGG 1777368
Query 10208 CTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACG 10267
| || | | | ||| | | |||||||| ||||| || ||||||| ||||||||||
Sbjct 1777369 CCCTCCAGGTGACAGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCTGTGATCTACG 1777428
Query 10268 CGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCA 10327
| ||||| || |||||||| | |||| ||||||||||| || | ||||||
Sbjct 1777429 CCTTCGTCGGCGAGAAGTTCCTGGGGTACCTTCGCCACTTCTTCCGCAGACAAGTGGCCC 1777488
Query 10328 TCTACCTCTGCAAGTACATCCCCTTCCT 10355
| ||| |||| || |||||||||||
Sbjct 1777489 TGCGCCTGGGCAAATATATCCCCTTCCT 1777516
Score = 206 bits (228), Expect = 3e-48
Identities = 575/868 (66%), Gaps = 27/868 (3%)
Strand=Plus/Plus
Query 176386 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 176445
|||| || | |||||| | | ||| || | || ||| || ||||| | || |
Sbjct 1776664 TTGGCCTGGTAGGCAATGTGATGGTGCTGCTGATCCTCACAAAATACAGGCGCCTCCGGA 1776723
Query 176446 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 176505
||| | ||||| | || | ||||||||| | || |||||||| ||||| | ||
Sbjct 1776724 TCCTGCCCAACATCTACTTGCTCAACTTGGCAGTCTCCGACTTGCTCTTTCTGTCGACCC 1776783
Query 176506 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 176565
||||||| ||||| |||| | | || | || | ||| |||||| | | |||
Sbjct 1776784 TGCCATTCTGGATTTACTACGTCA-AGTGGAACA--ACTGGGTTTTTGGCCACTGCATGT 1776840
Query 176566 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 176625
| || ||||| || | | || |||| ||||| | || |||| ||||||||
Sbjct 1776841 GCAAGTTGCTCTCCGGCCTCTATTTCATGGGCTTGTACGGGGAGTGTTTTTTCATCATCC 1776900
Query 176626 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 176685
|||| || ||||| |||| || || | ||| |||| || ||| || |||| | |
Sbjct 1776901 TGCTGACCATAGACCGGTACCTGGCCATCGTCCATGCCGTGTGTGCCCTGCGGTTCCGGA 1776960
Query 176686 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTT-GTTGTCC 176744
| || || | ||| || | | | |||| |||||| | ||| |||| | | || |
Sbjct 1776961 CCGTCACTTTTGGGATCCTCAGCAGTGTCCTCACCTGGGTCTTGGTAGGGCTAGCTG-CG 1777019
Query 176745 CTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATC 176802
|||||||| || |||| || ||| || || || | | |||| || | ||
Sbjct 1777020 CTCCCTGAGCTTGTCTTCCAGAAGTCCCAGGAGGATTCTGAGATGTTGTTCTGTA-GTTC 1777078
Query 176803 -CTTACTACCCAGAGATGTCTACAAATGTT--TGGAGGCGCGCCCACGTTGCAAAGGTGA 176859
||| ||||| ||| | | | || |||| || || | || | || |
Sbjct 1777079 ACTT--TACCCGGAG--GGCGAGGAAGACACCTGGAAACGGTTTCAGGCTGTCAGAGTCA 1777134
Query 176860 TTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCA 176919
|||||| ||||| | ||||||||||| ||||||| |||||||| | ||| || |
Sbjct 1777135 ATATGTTTTGTCTCGTGCTGCCTCTGCTCGTTATGGCCGTCTGCTATACCGGAATCATTA 1777194
Query 176920 GAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCA 176979
|| ||| ||| ||||||| |||| |||| ||||||||||| ||||||| |||||||
Sbjct 1777195 AAACGCTGATGAAATGCCCCAGTAAGAGGAAGGACAAGGCCATCCGGCTCATTTTTGTCA 1777254
Query 176980 TCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCT 177039
||||||||| || ||| |||| ||| | ||||||||| | |||||| | | || |
Sbjct 1777255 TCATGGTGGTCTTTTTCCTTTTCTGGGCCCCCTACAACCTGGTTCTCTTTTTCAACACTT 1777314
Query 177040 TTC-ACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTA-----ACTTGGACATGG 177093
||| | ||| |||||| || || || ||||||| | | ||||| |||
Sbjct 1777315 TTCAAAGCA--TCTTCTT----TGAGATGAGCTGTGAGCAGAACAAACAGCTGGACGTGG 1777368
Query 177094 CTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACG 177153
| || | | | ||| | | |||||||| ||||| || ||||||| ||||||||||
Sbjct 1777369 CCCTCCAGGTGACAGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCTGTGATCTACG 1777428
Query 177154 CGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCA 177213
| ||||| || |||||||| | |||| ||||||||||| || | ||||||
Sbjct 1777429 CCTTCGTCGGCGAGAAGTTCCTGGGGTACCTTCGCCACTTCTTCCGCAGACAAGTGGCCC 1777488
Query 177214 TCTACCTCTGCAAGTACATCCCCTTCCT 177241
| ||| |||| || |||||||||||
Sbjct 1777489 TGCGCCTGGGCAAATATATCCCCTTCCT 1777516
>seq2337
Length=679044
Score = 168 bits (186), Expect = 8e-37
Identities = 134/160 (84%), Gaps = 7/160 (4%)
Strand=Plus/Minus
Query 138081 GCAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATC 138140
|||||||| ||||||| |||||| || || ||||||||||| ||||||||||| |
Sbjct 369724 GCAGCGCCGAAGCCTCAGCCTGAGTGTCTTCAGCTTTTCCCCAAGGGAGTTCACGTG--- 369668
Query 138141 CTTTTCCTG--GTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAAC 138198
|||| || ||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 369667 --TTTCTTGATGTCCAGGCTCTGGTTCTCAGCCTGGGGCATCACCTCCTCCAGGTAAAAC 369610
Query 138199 TGGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
||||||||||| |||| ||| ||||| |||||||||||||
Sbjct 369609 TGGATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 369570
Score = 127 bits (140), Expect = 2e-24
Identities = 85/95 (89%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981
||| ||||||||||| | |||||||||| ||||||||||| |||||||||||||||||
Sbjct 371864 TCATTTTTTCATCTTCATTGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 371805
Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
||||||||| |||||||||||||| || |||||||
Sbjct 371804 GCTCATGGCTTTGTAGACCCCTTTCTCTTGGAGCT 371770
Score = 91.5 bits (100), Expect = 2e-13
Identities = 63/71 (89%), Gaps = 3/71 (4%)
Strand=Plus/Minus
Query 138236 CCTTAAAGTCTTCCAGCAGGGACCCGTCCAGCAACATGTTGTCCAGCTGGTCCTTCAT-- 138293
|||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 369297 CCTTAAAGTCCTCCAGCAAGGACCCGTTCAGCAATATGTTGTCCAGCTGGTCCTTCATTT 369238
Query 138294 -CTGAAAGAAG 138303
||| ||||||
Sbjct 369237 GCTGCAAGAAG 369227
Score = 89.7 bits (98), Expect = 6e-13
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356
|||||| | ||| ||| || |||||| || | ||||||||| |||||| |||||||||
Sbjct 368445 AAAGAAAGCCTTCACCTTGTCGAAGGCAGCTCGGAGCTCGTGAAGCATGCTGGGCAGGCT 368386
Query 138357 GG-TGGGCAATGTAGGGCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415
|| |||| | || | |||| || | ||||| || | | | | ||||| ||
Sbjct 368385 GGCTGGGAAGTG-GGTGCAGCTGTTCTCAGACGGGGTGCCCTGGTCTCGGCTGGCCCCCA 368327
Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGG 138463
||||||||||||| |||||||| || ||||| | || ||| |||||
Sbjct 368326 CCCCGGCCAGGAGGACCAGGCAGCAGAGCAGTGCTGAGCTGGGCATGG 368279
>seq1989
Length=1255173
Score = 152 bits (168), Expect = 6e-32
Identities = 131/162 (81%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||| | |||| ||| |||| ||||||||| ||||||| ||||||||| ||||||||||||
Sbjct 654427 AGGTCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 654368
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| || || ||||| || | || | |||||||||||||||||| ||||| || | ||
Sbjct 654367 ACACCAAGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 654308
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|| ||||||||||| ||| ||||| || || |||||||||
Sbjct 654307 ACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATG 654266
>seq1960
Length=1325267
Score = 129 bits (142), Expect = 7e-25
Identities = 141/185 (76%), Gaps = 3/185 (2%)
Strand=Plus/Plus
Query 145727 CGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGG 145786
|||| | ||||| || |||| |||| |||| ||| || | |||| ||| |||||||
Sbjct 896298 CGTGTACAAAGTCACCTGGCTTCAGGCG-GTGATGTGTGCAATCATGAAGG--AGCAGGG 896354
Query 145787 AGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCT 145846
| || |||| |||||||||||||| | ||| |||||||| | || | |||||||||||
Sbjct 896355 AATATTTGGCAATGTTGAAGGGCACACTCAGGCCCATGTCTGCTGATCTCTGGTACAGCT 896414
Query 145847 GGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGG 145906
||||||| ||||| | | | |||| ||| |||||| ||| || ||| | |||||||
Sbjct 896415 GGCAGGACAGCTCACTGTTCACCACACAGAGCTGGCAAAGGGCATGACAGAGAGGCAGGG 896474
Query 145907 CCATG 145911
|||||
Sbjct 896475 CCATG 896479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590058433859600
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