Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq1708 262 5e-65
seq413 176 5e-39
seq2215 154 2e-32
seq1801 102 1e-16
>seq1708
Length=2008767
Score = 262 bits (290), Expect = 5e-65
Identities = 261/338 (77%), Gaps = 0/338 (0%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
||||||| |||||||||||||| | | | | ||| | || |||||||||| ||||||
Sbjct 1118154 AGCAGGGTTTCGATGTCGGGCTCGATGTCGATCGTCGGAAAGTGGTGGCTGTATCTGCGC 1118213
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| || |||||| ||||| | |||||||||||||||||||| | ||||||||||
Sbjct 1118214 ACAGGAACGCCGTCCCGGCCCACAAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGG 1118273
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
|| || ||||||||| |||| || ||| ||| ||| ||||| | | || ||| |||
Sbjct 1118274 CATACCGGAGACCAGATGATGAACTTGGGATCGGTCATGAGCGCGGTGGTGGTGTCACTA 1118333
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
||||| ||||| ||||| | ||||||||||||||| || ||| |||| ||||| |||
Sbjct 1118334 GGCGCGGGCAGAGCCTCCTTCAAGAAGGCGAAGAGCGGGTGCGCCTTTGCGCCGTTCACC 1118393
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||||||||| | ||||| || ||||| ||| || || ||||||| |||
Sbjct 1118394 TCGCACTTCTCGAAGAGGGTGAAGTTGGGTTCGAACCCGCCGCCGGGTCGGACGTACTTG 1118453
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394
|| ||| || |||||| | || | ||||||||||||
Sbjct 1118454 AGAGAATTCAGGATCTCTTCGTTTTTGGCGTTTTCCTG 1118491
Score = 205 bits (226), Expect = 1e-47
Identities = 172/211 (82%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || ||||||||||| |||||||| || ||||| ||||| ||||| | || ||||
Sbjct 1118694 CCTGATGCCCGAACTGGTTGCACGGGAAGCCGAGCACCACCAGGCCCCGGGGGCCGAGGC 1118753
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||| |
Sbjct 1118754 GCCGCTGCAGCTCGTTCATCTGAGTGTAGTCCCGGACCGTTGTGCCTCAGAGCGACGCCA 1118813
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
| ||||||||||||| ||| |||||| | | |||| | |||||| || || || || |
Sbjct 1118814 CATTCTCGATGAGCAGCACCTTGCCCCGCAGGGAGCCCAGGCTCACGGGCTCCCCGCCCG 1118873
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
| |||||| || ||||||| |||||| ||
Sbjct 1118874 CCAGCGGGCGCGCGGAGAAGGGGTACACGGA 1118904
>seq413
Length=2965004
Score = 176 bits (194), Expect = 5e-39
Identities = 246/348 (71%), Gaps = 13/348 (4%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
||||||| |||| ||| ||||| | | | | |||| | ||||| ||||| ||||||||
Sbjct 367464 AGCAGGGTTTCGAGGTCCGGCTCGATGTCGACGGTCGGAAAGCGGCGGCTGGACCTGCGC 367523
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| || | || ||| ||||||| | || |||||| || || ||| ||||| | ||||
Sbjct 367524 ACAGGGGCGCGGTCCCGGCCCACCAGGGACCTCTCGACGTGCCCGGCAACGTCCTGGCGG 367583
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| ||||| | ||| ||| || ||||| || |||| ||
Sbjct 367584 CACACCGGAGACCAGGTAATGAACCTGGGATCGGTCGGGAGCGCCACGGTGACGTCACTG 367643
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
||||| ||||| | ||||| |||||| | ||| || || || |||
Sbjct 367644 GGCGCGGGCAG-------------ACGGCGAGGAGCGGGGGCGCCTGGGCGCCATTCACC 367690
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||||||||| | ||||| |||||||| | | | ||||| || ||| || |
Sbjct 367691 GCGCACTTCTCGAAGAGCGTGAAGTTGGGCTCGAACCTGCTGCCAGGTCGCACGGACTGC 367750
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAAC 83404
||||| || |||||| | || ||| || ||||| ||| || ||
Sbjct 367751 AGGGACTCCAGGATCTCTTCGTTGCTGGCCTTCTCCTGATGATCGCAC 367798
>seq2215
Length=832077
Score = 154 bits (170), Expect = 2e-32
Identities = 184/247 (74%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 83324 GGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGG 83383
|||||||| |||| ||| | |||| || ||| |||||| || ||||| |||| |
Sbjct 522160 GGCTCGAACCCGTCGCCAAGGCGGATGTACTTGAGGGAATTCACGATCTATTTGTTCTTG 522101
Query 83384 GCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCT 83443
| || ||||| || ||||||||||| |||||||| |||||||| || || ||||| |
Sbjct 522100 GGATTCTCCTGATGTCCGAACTGGTTGCACGGGAAGCCAAGCACCACTAGGCCCCGGGGC 522041
Query 83444 CCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGG 83503
| | ||||||||||||||| ||| |||| ||||| || ||||||| | ||||||||
Sbjct 522040 CAGAAGCGCCGCTGCAGCTCATTC-TCTGGGTGTA-GCCTGGACCGTTGTGCCTCAGAGC 521983
Query 83504 GACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCT 83563
|| | || ||||| | ||||| | | |||||| | | ||| | ||||||||| ||
Sbjct 521982 TACACCACATTCTCAAAGAGCAGCATCTTGCCCCGCAGGGAGCTCAGGCTCACAGGCTCC 521923
Query 83564 CCTCCGG 83570
|| ||||
Sbjct 521922 CCGCCGG 521916
>seq1801
Length=1694280
Score = 102 bits (112), Expect = 1e-16
Identities = 202/290 (70%), Gaps = 13/290 (4%)
Strand=Plus/Plus
Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468
||| || |||| || |||| | ||| || ||| ||| ||||||||| ||| |||
Sbjct 304602 GCAGCTTCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 304660
Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528
||||| | | || || |||||||| || |||||||||| || ||| | |||||||
Sbjct 304661 TCGTGCATCTCTTCCCCGAGCTCTTCACCCATGAGAACCTGCGCAAGCAGTACAACTGCA 304720
Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTC---CGGCAC 50584
||||||| | |||||| |||| || |||||| ||| | | |||| || |||
Sbjct 304721 GCGGCTCCCTAGGCAAGAAGCAG-CTAGACCCGTCCCGCAT---CAAGCTCATTCGCCAC 304776
Query 50585 TATGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTG 50644
|| |||||| |||| |||| ||| || || ||||| |||| |||| ||
Sbjct 304777 TACGTGCAGCTGCTCTACCCACGGGCCAAGAATGACCGCGTCTGGACGCTGGAGTTTGTG 304836
Query 50645 GCGTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693
| ||||| ||||||||||||||||| | |||||| || ||||||
Sbjct 304837 GGCAAACTGGATGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 304884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608777851199600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |