Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1767 84.2 2e-11
seq1424 82.4 6e-11
>seq1767
Length=1785757
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| ||||| | || ||||| | |||||| |||||||| | |||||||||||||
Sbjct 523922 GATAAGGAAGGAATTCCTCCTGATCAGCGAAGACTGATCTTTGCTGACAAACAATTGGAA 523863
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||| || || | || ||||| ||||||||||| ||||||||||| | |||||
Sbjct 523862 GATGGATGTACCTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 523804
>seq1424
Length=2309046
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/220 (69%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 25024 ATAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAA 25083
|||| || ||||||||||| ||| | || || |||| ||||| ||||| ||| |||
Sbjct 23676 ATAG-GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAG 23618
Query 25084 CGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGC 25143
||||||| || || | | || | ||| || || ||||| ||||| | |
Sbjct 23617 TGGAACCCAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCC 23558
Query 25144 CCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGG 25203
| ||| || || || || |||||||| ||||| || |||||||| | ||| |
Sbjct 23557 CTCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTT 23498
Query 25204 CCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243
| |||||||| ||||| ||||| || || || || ||||
Sbjct 23497 CTGATTACAACATTCAGAAGGAGTCGACCCTGCATCTGGT 23458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410784333600860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |