Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1960 96.9 2e-15
>seq1960
Length=1325267
Score = 96.9 bits (106), Expect = 2e-15
Identities = 221/326 (68%), Gaps = 5/326 (2%)
Strand=Plus/Plus
Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066
||||||||||||| || || ||||||| | | || ||| ||||||||| |
Sbjct 896217 TTGGGAAAGGCCTTGGTTCTCAATGAAGCTGCATTTTCAGCAGTTCAGTGTGATTCAGAA 896276
Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126
||||||| || | | |||| ||| | ||| || || || | | | |||| || |
Sbjct 896277 AAATGTGTGCCTATGGCAAAGCGTGTACAAAGTCACCTGG-CTTCAGGCGGTGATGTGTG 896335
Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186
| ||||| ||| | || ||||| | |||||||| || ||||| | || ||||| |
Sbjct 896336 CAATCAT-GAAG-GAGCAGGGAATATTTGGCAATGTTGAAGGGCACACTCAGGCCCATGT 896393
Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAAGCTTTC-CATCACACACATAAAACTGACTC 97245
| |||||||| || || | ||| ||||| |||| | |||| |||| | | ||| |
Sbjct 896394 CTGCTGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCAC-CACACAGAGCTGGCAA 896452
Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305
| |||||||| | |||| ||||| |||| |||| |||||||| |||||
Sbjct 896453 AGGGCATGACAGAGAGGCAGGGCCATGCGAGGAAAATCTTTTGGATTCCAAGAACACAGG 896512
Query 97306 AACATTCTTCTATCGGTTGGGTTTGT 97331
| |||||||| || | ||||| ||
Sbjct 896513 ATGATTCTTCTGTCATTGGGGTTGGT 896538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346773476189300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |