Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq1767 89.7 8e-13
seq2080 84.2 3e-11
>seq1767
Length=1785757
Score = 89.7 bits (98), Expect = 8e-13
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| |||||| || || | ||| | |||||| || ||| || || || || || ||
Sbjct 523789 CCACCATAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 523847
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| || | | ||| || |||||||| ||||||| |||| |||| ||||||| |||||
Sbjct 523848 CAAGGTACATCCATCTTCCAATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGG 523907
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 523908 AATTCCTTCCTTATCCTG 523925
>seq2080
Length=3818131
Score = 84.2 bits (92), Expect = 3e-11
Identities = 98/130 (75%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 146059 AAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTC 146117
|||||| || || | ||| | ||| || || ||| || || | || || || |||||
Sbjct 1111791 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTCGTAGTCAGATAGAGTAT 1111733
Query 146118 TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTT 146177
| ||| || | ||| || |||||||| |||| ||||||||||| |||||||||||||
Sbjct 1111732 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTT 1111673
Query 146178 CTTTATCTTG 146187
||||||| ||
Sbjct 1111672 CTTTATCCTG 1111663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743503257740800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |