Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 102 8e-17
seq654 95.1 1e-14
>seq1669
Length=5184857
Score = 102 bits (112), Expect = 8e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|||||||||| ||| | | || ||||||||| | | | | ||| |||| |
Sbjct 4069569 TTTAAAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCCGCCATCACTGCAAAAC 4069510
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
||||| || ||||| || |||||||||||||| ||||||||||| ||||||||||
Sbjct 4069509 GCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTCTTTCCTTCTAAAGAAATATTTT 4069450
Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028
||||||||||||| ||||||| ||
Sbjct 4069449 CCATAAAATCAAAGGGATTTTCTG 4069426
Score = 82.4 bits (90), Expect = 7e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106
|||| | ||||| | |||||| || || ||||| || |||||||||||||| ||| |||
Sbjct 4068669 ATCCAAGTTCCACAAGTAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACAC 4068610
Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAA 16149
| |||||||| || | ||| || | ||||||||||||||
Sbjct 4068609 AATTCATTCCAATGAGGCCAACTGGCAAGGCTTCTGTTAAAAA 4068567
>seq654
Length=93227
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | || || ||||| || || || ||||| ||||||||||| ||
Sbjct 54044 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 53985
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 53984 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGCG 53925
Query 16379 AC 16380
||
Sbjct 53924 AC 53923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462497604314000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |