Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1960 113 4e-20
>seq1960
Length=1325267
Score = 113 bits (124), Expect = 4e-20
Identities = 229/337 (68%), Gaps = 5/337 (1%)
Strand=Plus/Minus
Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA-GACATTTTGGAGCTGAATATG 20272
||| ||| ||| | || || ||||| |||| |||| | | || || || ||| |
Sbjct 896664 AGAAGGGTGTTTAGACCCAGTTTATGGCTTTCGGTGGAAGTCTTTGGGGGGCAGAAGACA 896605
Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332
|| ||| | || |||| | || ||||||| ||| |||| ||||| || | ||
Sbjct 896604 AAGATATGTATTCAGATTACTCAGGTCAAGGAGCAGACCAATAGCAAAAGGTGACACATG 896545
Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392
|| ||||| ||||| || ||||||||||| || | || | ||||| | ||||||
Sbjct 896544 --ATCAAAACCAACCCCAATGACAGAAGAATCATCCTGTGTTCTTGGAATCCAAAAGATT 896487
Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452
| ||| ||||| |||||| |||||| || ||||| | | || | || | ||
Sbjct 896486 TTCCTCGCATGGCCCTGCCTCTCTGTCATGCCCTTTGCCAGCTCTGTGTGGTGAACAGTG 896427
Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512
| |||| || || |||| || |||| || || ||||| ||| |||| || ||||| |
Sbjct 896426 AGCTGTCCTGCCAGCTGTACCAGAGATCAGCAGACATGGGCCTGAGTGTGCCCTTCAACA 896367
Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549
|||| | ||| | ||||| | | |||||||||||
Sbjct 896366 TTGCCAAATATTCCCTGCT--CCTTCATGATTGCACA 896332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399171886013050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |