Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1960 113 4e-20 >seq1960 Length=1325267 Score = 113 bits (124), Expect = 4e-20 Identities = 229/337 (68%), Gaps = 5/337 (1%) Strand=Plus/Minus Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA-GACATTTTGGAGCTGAATATG 20272 ||| ||| ||| | || || ||||| |||| |||| | | || || || ||| | Sbjct 896664 AGAAGGGTGTTTAGACCCAGTTTATGGCTTTCGGTGGAAGTCTTTGGGGGGCAGAAGACA 896605 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || ||| | || |||| | || ||||||| ||| |||| ||||| || | || Sbjct 896604 AAGATATGTATTCAGATTACTCAGGTCAAGGAGCAGACCAATAGCAAAAGGTGACACATG 896545 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 || ||||| ||||| || ||||||||||| || | || | ||||| | |||||| Sbjct 896544 --ATCAAAACCAACCCCAATGACAGAAGAATCATCCTGTGTTCTTGGAATCCAAAAGATT 896487 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | ||| ||||| |||||| |||||| || ||||| | | || | || | || Sbjct 896486 TTCCTCGCATGGCCCTGCCTCTCTGTCATGCCCTTTGCCAGCTCTGTGTGGTGAACAGTG 896427 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||| || || |||| || |||| || || ||||| ||| |||| || ||||| | Sbjct 896426 AGCTGTCCTGCCAGCTGTACCAGAGATCAGCAGACATGGGCCTGAGTGTGCCCTTCAACA 896367 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 |||| | ||| | ||||| | | ||||||||||| Sbjct 896366 TTGCCAAATATTCCCTGCT--CCTTCATGATTGCACA 896332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171886013050