Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 89.7 4e-13
seq1767 82.4 6e-11
>seq1424
Length=2309046
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || || || || ||||| ||||||||||| || | | || | |||
Sbjct 22771 AGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCC 22830
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| |||||||| ||| ||||||| || || || || || | ||||||||||||
Sbjct 22831 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 22890
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | ||| || | ||| ||||||| ||| || ||| | ||||||| |
Sbjct 22891 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 22950
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||||| || || || ||||| |||||
Sbjct 22951 TTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || || || || || || ||||||||||| || | | || | ||||
Sbjct 23455 AGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCT 23514
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || || || || | ||||||||||||
Sbjct 23515 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 23574
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | ||| || | | | ||||||| ||| || ||| | ||||||| |
Sbjct 23575 TGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 23634
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|||||||||| || || || || |||||||||||
Sbjct 23635 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
>seq1767
Length=1785757
Score = 82.4 bits (90), Expect = 6e-11
Identities = 113/157 (72%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 18078 AATACATTTTCTTTTTGTTATCCTCCCCGTA--GTCTAAGTACCATGTGAAGTGTTGATT 18135
|| || | ||| |||| ||| | | || || |||| | || | ||||| || || |
Sbjct 523766 AAGACTTCTTCCTTTTCTTAGCACCACCATAAAGTCTCAACACAAGATGAAGAGTAGACT 523825
Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195
| ||||||||||||||||| | || || | |||||||||||||||| | ||| |||
Sbjct 523826 CCTTTTGAATGTTGTAGTCAGACAAGGTACATCCATCTTCCAATTGTTTGTCAGCAAAGA 523885
Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
| |||||| | ||||| || | |||||||||||
Sbjct 523886 TCAGTCTTCGCTGATCAGGAGGAATTCCTTCCTTATC 523922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379332488095050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |