Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1841 134 2e-26
seq654 111 2e-19
seq846 107 2e-18
seq1669 93.3 5e-14
>seq1841
Length=1603521
Score = 134 bits (148), Expect = 2e-26
Identities = 112/137 (82%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 610003 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATG 610062
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
|||||||||||||| | ||| ||||||||||| ||||| |||||||| || | | ||||
Sbjct 610063 GACTCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAA 610122
Query 62508 CTATTTCTAAGACCGTA 62524
|||||||| | ||| ||
Sbjct 610123 CTATTTCTTATACCATA 610139
Score = 100 bits (110), Expect = 4e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687
|| || |||||||| || | || || || | | ||| || || || || || || |||
Sbjct 620899 TAGGTTTCATATGGGCCATGCTCCTTGGCCAAATCACAGCTGGCTTCCAAGGCTCCATAA 620958
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
||||||||||||||||| | |||||| | || || || || || ||||| |||||
Sbjct 620959 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 621018
Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807
| | |||||||| ||||| || | ||||| || ||||| ||||| || | ||| |
Sbjct 621019 CTCATCAGAATAAAAGCGTCTGCCAGACCTTGTACCCCAATTCCGATGGGGCGATGGCGT 621078
Query 62808 TTATTAGA 62815
||||| ||
Sbjct 621079 TTATTTGA 621086
Score = 96.9 bits (106), Expect = 4e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| ||||||||||| || | || || || || | |
Sbjct 625533 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCGCG 625592
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| || ||| | | ||||| |||||||
Sbjct 625593 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATATCTAAATGCCA 625652
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 625653 AGGCTCCAGGTAAATAGC 625670
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566
|| |||| ||| | || |||||| ||| | | | ||| |||||||| || ||
Sbjct 628170 ATGTAGCTGCCAGTAGCTCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTG 628229
Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626
|| || ||||| || |||||| |||||||| |||||||| ||||||||||| |||||
Sbjct 628230 GAAATCAATGCACACTGTTTTAGAGTGTCATAAATGCCTTCAATGCTATCATCTTTCATG 628289
Query 63627 TTAAGTAGAAAACAGCTA 63644
| || || |||||||||
Sbjct 628290 CTTAGAAGGAAACAGCTA 628307
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
|||| || | ||| |||||||| ||||| | || || | || | || || || ||||
Sbjct 636388 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAACCCTTGCTGCCAGAA 636447
Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125
||||||| || || || | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 636448 TGGCATAGTCGGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 636507
Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171
||| || || || || ||| | |||| ||||| || || |||||
Sbjct 636508 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 636553
>seq654
Length=93227
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || |
Sbjct 54046 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCT 53987
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| ||||| || || || || || ||||||||||||||||| ||||||||||| |
Sbjct 53986 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 53927
Query 33724 C 33724
|
Sbjct 53926 C 53926
Score = 96.9 bits (106), Expect = 4e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901
|||||||| ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 53115 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 53056
Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947
|| || || ||||||||||| | || || || ||||| ||||||
Sbjct 53055 AATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTCT 53010
>seq846
Length=2608177
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||||| ||| || |||||||||| || ||||||||||||| ||
Sbjct 2101744 GTTACTTTCTATGATGTATATATTATTCTACAAGCTTTTATACTGACTACTGCAGTAATT 2101685
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
|||| | ||||| || |||||| ||||| || ||||||||||| ||| ||| | ||||
Sbjct 2101684 CTTGGTTTGACTGTATATACTCTGCAATCTAAAAGAGATTTCAGCAAATTTGGAGCAGG 2101626
Score = 82.4 bits (90), Expect = 1e-10
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437
|||||| | || || |||| |||||||||||| ||||| |||| |||||||| || |||
Sbjct 2106924 GGATCTTTGGGTTTCATTTCAGCATTGACTTTAAACAGATATAAGCATCCCCTTAACCTG 2106865
Query 188438 TACCTACTTTGTGGATTT 188455
||||| |||| |||||||
Sbjct 2106864 TACCTGCTTTTTGGATTT 2106847
>seq1669
Length=5184857
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || ||||| |||||||| ||||| || || | || ||
Sbjct 4063058 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 4062999
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
| ||| ||||| | ||| || ||||| || ||||| |||||||| || |||||||||||
Sbjct 4062998 AACCAGAATATAGCAGCAAAGGATCCCGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 4062940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629797996927200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |