Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq1989 136 3e-27
seq1960 95.1 1e-14
>seq1989
Length=1255173
Score = 136 bits (150), Expect = 3e-27
Identities = 128/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
||||| | |||| ||| ||||||| || || || |||||||||||||||||||| || |
Sbjct 654429 TCAGGTCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGG 654370
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| || || |||||||| || || ||||||||||||||||||||||||||||| ||
Sbjct 654369 GCACACCAAGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCA 654310
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151
|||| || ||||| || | | || || ||||| || |||||
Sbjct 654309 CCACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCAT 654267
>seq1960
Length=1325267
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/138 (76%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 20963 CAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAG 21022
||| | ||| |||||||| || || |||||| |||| ||| || |||| | | ||
Sbjct 896293 CAAAGCGTGTACAAAGTCACCTGGCTTCAGGCG-GTGATGTGTGCAATCATGAAGG--AG 896349
Query 21023 GAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTA 21082
|||| || |||| ||||| || || || | ||||||||||| || || ||||||||
Sbjct 896350 CAGGGAATATTTGGCAATGTTGAAGGGCACACTCAGGCCCATGTCTGCTGATCTCTGGTA 896409
Query 21083 CAGCTGGCAGGACAGCTC 21100
||||||||||||||||||
Sbjct 896410 CAGCTGGCAGGACAGCTC 896427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427763018335200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |