Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1424 84.2 2e-11 >seq1424 Length=2309046 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/245 (68%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| | | || | ||| ||||| || || || || ||||||||||| Sbjct 23440 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAA 23499 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | || ||||| || | || | | || ||||| || Sbjct 23500 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 23559 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || || ||| ||||||| | || ||||| || || ||| || Sbjct 23560 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACT 23619 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA-AAATAA 15375 || | ||| ||||| || || ||||| || || || || |||||||| ||||| |||| Sbjct 23620 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT-TTTGACCTATAA 23678 Query 15376 AATTT 15380 ||||| Sbjct 23679 AATTT 23683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362168208993090