Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 89.7 3e-13
>seq1424
Length=2309046
Score = 89.7 bits (98), Expect = 3e-13
Identities = 161/234 (69%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | |||| |||| ||||| |||||||| || || || |||||||||||
Sbjct 23439 ACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGA 23498
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| | || | || |||| ||||| || ||| || | | |||||||| | ||
Sbjct 23499 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGG 23558
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|||||||| || || | | | ||| ||||| | | || ||||| ||||||
Sbjct 23559 GATGCCTTCCTTATCCTGGATCTTGGCC---TTTACATTCTCGATGGTGTCACTGGGTTC 23615
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| ||||| || || || || || || || || || ||||| |||||||| ||
Sbjct 23616 CACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||| ||||| ||||||||||| || || ||||||||||| | | || | || |||
Sbjct 22774 ACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 22833
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277
| || || || ||| || | | |||||||| | || |||||||| || || |
Sbjct 22834 AGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGG 22893
Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | ||| || || | | ||| ||||| |||||| || ||||| || || ||
Sbjct 22894 ATCTTGGCC---TTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 22950
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || || |||||||| |||||
Sbjct 22951 TTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318767926096020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |