Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 114 1e-20
>seq1669
Length=5184857
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || |||||||| |||| ||| |
Sbjct 4063060 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 4063001
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| |||||||||||||| || ||||| || || |||||||| || || ||||| |
Sbjct 4063000 TTAACCAGAATATAGCAGCAAAGGATCCCGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 4062941
Query 13293 CTATCAACCTTTCACC 13308
| | || |||||| ||
Sbjct 4062940 CCACCACCCTTTCCCC 4062925
Score = 89.7 bits (98), Expect = 4e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922
||||| || ||||| ||| ||||| || ||||| ||||||||||| ||||||||||||
Sbjct 4069507 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTCTTTCCTTCTAAAGAAATATTTTCC 4069448
Query 12923 ATAAAATCGAAAGGATTTT 12941
|||||||| || |||||||
Sbjct 4069447 ATAAAATCAAAGGGATTTT 4069429
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039
||||||||||| |||||||| || ||||||||||| ||| |||| |||||||| || |
Sbjct 4068652 AATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACACAATTCATTCCAATGAGG 4068593
Query 13040 TTTACAGGCATAGCTTCTGTTAAAAA 13065
|| |||| ||||||||||||||
Sbjct 4068592 CCAACTGGCAAGGCTTCTGTTAAAAA 4068567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430969321030980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |