Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq2337 109 5e-19
>seq2337
Length=679044
Score = 109 bits (120), Expect = 5e-19
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | || |||||||| ||||||||| |||| |||||||||
Sbjct 369572 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 369631
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || || | | ||||||||| | ||||| ||||| || || ||||||
Sbjct 369632 CCCCAGGCTGAGAACCAGAGCCTGGACATCAAGAAACACGTGAACTCCCTTGGGGAAAAG 369691
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTGC 129026
|| || || || | || | || || ||||||
Sbjct 369692 CTGAAGACACTCAGGCTGAGGCTTCGGCGCTGC 369724
Score = 84.2 bits (92), Expect = 2e-11
Identities = 68/81 (84%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163
||| || ||||| |||||||||||||| ||||| |||||||||||||||||| | |||||
Sbjct 371783 AGGGGTCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACATAGAAACCTACAT 371842
Query 129164 GACTACTAA-ATAATAAAATG 129183
||| | || || | ||||||
Sbjct 371843 GACAATGAAGATGAAAAAATG 371863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447736463768800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |